Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RAPGEF4Q8WZA2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RAPGEF4Q8WZA2 MRPS18AP1-201ENST00000414458 589 ntBASIC22.07■■□□□ 1.12
RAPGEF4Q8WZA2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
RAPGEF4Q8WZA2 CRB3P1-201ENST00000449338 276 ntBASIC22.07■■□□□ 1.12
RAPGEF4Q8WZA2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC22.07■■□□□ 1.12
RAPGEF4Q8WZA2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC22.07■■□□□ 1.12
RAPGEF4Q8WZA2 AL590560.3-201ENST00000623350 461 ntBASIC22.07■■□□□ 1.12
RAPGEF4Q8WZA2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC22.07■■□□□ 1.12
RAPGEF4Q8WZA2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RAPGEF4Q8WZA2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RAPGEF4Q8WZA2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
RAPGEF4Q8WZA2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC22.07■■□□□ 1.12
RAPGEF4Q8WZA2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
RAPGEF4Q8WZA2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RAPGEF4Q8WZA2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RAPGEF4Q8WZA2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RAPGEF4Q8WZA2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RAPGEF4Q8WZA2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 GAPDHP21-201ENST00000450301 1010 ntBASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 CECR7-204ENST00000609932 568 ntTSL 2 BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAPGEF4Q8WZA2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 GRAMD4P3-201ENST00000621665 1669 ntBASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 TSSK5P-201ENST00000423978 907 ntBASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 AP005018.1-201ENST00000525475 301 ntBASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 AC007967.4-201ENST00000614700 386 ntBASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 SPDYE12P-201ENST00000618416 771 ntBASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 AC138932.1-201ENST00000534164 6830 ntBASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC22.05■■□□□ 1.12
RAPGEF4Q8WZA2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 AC008764.6-201ENST00000595909 2069 ntBASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 AC009118.2-201ENST00000613275 655 ntBASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms