Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 KRT17P4-201ENST00000429445 819 ntBASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 RBM7-208ENST00000545678 867 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 FOXO1B-201ENST00000504678 1527 ntBASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 SERBP1P3-201ENST00000459980 809 ntBASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 TLE2-205ENST00000586422 389 ntTSL 5 BASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 AC006548.2-201ENST00000605217 529 ntBASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC6.71□□□□□ -1.33
SYNE2Q8WXH0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 AC124068.2-201ENST00000569473 1109 ntBASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 AC133539.2-201ENST00000604757 467 ntBASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 AL627230.2-201ENST00000613254 655 ntBASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 ACTG1P3-201ENST00000431775 1114 ntBASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 AC107918.2-201ENST00000530817 355 ntBASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 TIMM17BP1-201ENST00000545713 516 ntBASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 AC009486.1-201ENST00000569860 813 ntBASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 CLUHP6-201ENST00000580789 941 ntBASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 UBQLN4P1-201ENST00000461599 1801 ntBASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 AL021920.2-201ENST00000624828 1351 ntBASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 TUBBP5-203ENST00000508529 1334 ntBASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNE2Q8WXH0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms