Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC83Q8IWF9 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 AC106795.1-205ENST00000512851 1056 ntBASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC83Q8IWF9 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC83Q8IWF9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 ALOX12P2-203ENST00000570921 1945 ntBASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 PRYP5-201ENST00000451909 266 ntBASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 AP002490.2-201ENST00000524791 560 ntBASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC83Q8IWF9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 AL022326.1-202ENST00000641533 845 ntBASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC83Q8IWF9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms