Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 AC134043.2-201ENST00000624206 2238 ntBASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC25.27■■□□□ 1.64
CDC42BPAQ5VT25 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 HLA-V-201ENST00000429037 534 ntBASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 BTBD7P1-201ENST00000447253 1453 ntBASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 DGCR5-201ENST00000399539 862 ntBASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC25.26■■□□□ 1.63
CDC42BPAQ5VT25 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CDC42BPAQ5VT25 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CDC42BPAQ5VT25 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC25.25■■□□□ 1.63
CDC42BPAQ5VT25 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
CDC42BPAQ5VT25 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CDC42BPAQ5VT25 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC25.25■■□□□ 1.63
CDC42BPAQ5VT25 AC006277.1-201ENST00000624348 1610 ntBASIC25.25■■□□□ 1.63
CDC42BPAQ5VT25 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
CDC42BPAQ5VT25 DPM2-202ENST00000373110 738 ntTSL 2 BASIC25.25■■□□□ 1.63
CDC42BPAQ5VT25 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
CDC42BPAQ5VT25 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CDC42BPAQ5VT25 IFT20-216ENST00000588477 774 ntTSL 5 BASIC25.25■■□□□ 1.63
CDC42BPAQ5VT25 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
CDC42BPAQ5VT25 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CDC42BPAQ5VT25 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
CDC42BPAQ5VT25 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
CDC42BPAQ5VT25 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 AC135586.1-201ENST00000539323 574 ntBASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 MIR6752-201ENST00000618442 71 ntBASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms