Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
CENPFP49454 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CENPFP49454 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CENPFP49454 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.89■□□□□ 0.61
CENPFP49454 RNU1-129P-201ENST00000384064 167 ntBASIC18.89■□□□□ 0.61
CENPFP49454 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.89■□□□□ 0.61
CENPFP49454 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.89■□□□□ 0.61
CENPFP49454 AC005412.3-201ENST00000580309 715 ntBASIC18.89■□□□□ 0.61
CENPFP49454 U1.21-201ENST00000580816 167 ntBASIC18.89■□□□□ 0.61
CENPFP49454 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.89■□□□□ 0.61
CENPFP49454 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.89■□□□□ 0.61
CENPFP49454 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CENPFP49454 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CENPFP49454 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CENPFP49454 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CENPFP49454 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CENPFP49454 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CENPFP49454 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.89■□□□□ 0.61
CENPFP49454 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CENPFP49454 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.89■□□□□ 0.61
CENPFP49454 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CENPFP49454 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.88■□□□□ 0.61
CENPFP49454 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CENPFP49454 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CENPFP49454 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.88■□□□□ 0.61
CENPFP49454 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.88■□□□□ 0.61
CENPFP49454 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.88■□□□□ 0.61
CENPFP49454 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.88■□□□□ 0.61
CENPFP49454 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.88■□□□□ 0.61
CENPFP49454 RPSAP52-203ENST00000622976 1023 ntBASIC18.88■□□□□ 0.61
CENPFP49454 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CENPFP49454 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.88■□□□□ 0.61
CENPFP49454 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CENPFP49454 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CENPFP49454 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CENPFP49454 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CENPFP49454 AC023310.3-201ENST00000557027 670 ntBASIC18.88■□□□□ 0.61
CENPFP49454 AC100756.1-201ENST00000562736 682 ntBASIC18.88■□□□□ 0.61
CENPFP49454 AC138749.3-201ENST00000567691 622 ntBASIC18.88■□□□□ 0.61
CENPFP49454 AC116165.1-201ENST00000611806 668 ntBASIC18.88■□□□□ 0.61
CENPFP49454 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.88■□□□□ 0.61
CENPFP49454 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.88■□□□□ 0.61
CENPFP49454 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.88■□□□□ 0.61
CENPFP49454 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18.88■□□□□ 0.61
CENPFP49454 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.88■□□□□ 0.61
CENPFP49454 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.88■□□□□ 0.61
CENPFP49454 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CENPFP49454 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.87■□□□□ 0.61
CENPFP49454 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
CENPFP49454 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.87■□□□□ 0.61
CENPFP49454 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.87■□□□□ 0.61
CENPFP49454 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.87■□□□□ 0.61
CENPFP49454 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 AC098850.1-201ENST00000419919 790 ntBASIC18.87■□□□□ 0.61
CENPFP49454 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.87■□□□□ 0.61
CENPFP49454 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC18.87■□□□□ 0.61
CENPFP49454 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
CENPFP49454 LINC00304-203ENST00000565008 1864 ntBASIC18.87■□□□□ 0.61
CENPFP49454 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.87■□□□□ 0.61
CENPFP49454 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CENPFP49454 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CENPFP49454 AL353732.1-201ENST00000569618 1459 ntBASIC18.87■□□□□ 0.61
CENPFP49454 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CENPFP49454 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.87■□□□□ 0.61
CENPFP49454 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.87■□□□□ 0.61
CENPFP49454 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.87■□□□□ 0.61
CENPFP49454 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.87■□□□□ 0.61
CENPFP49454 CROCCP4-201ENST00000457096 498 ntBASIC18.87■□□□□ 0.61
CENPFP49454 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.87■□□□□ 0.61
CENPFP49454 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.87■□□□□ 0.61
CENPFP49454 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.87■□□□□ 0.61
CENPFP49454 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CENPFP49454 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.87■□□□□ 0.61
CENPFP49454 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CENPFP49454 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.86■□□□□ 0.61
CENPFP49454 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CENPFP49454 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CENPFP49454 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CENPFP49454 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CENPFP49454 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CENPFP49454 AC073389.1-201ENST00000595595 795 ntBASIC18.86■□□□□ 0.61
CENPFP49454 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms