Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMA1P25391 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMA1P25391 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.4■□□□□ 0.22
LAMA1P25391 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMA1P25391 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.4■□□□□ 0.22
LAMA1P25391 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.4■□□□□ 0.22
LAMA1P25391 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.4■□□□□ 0.22
LAMA1P25391 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.4■□□□□ 0.22
LAMA1P25391 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMA1P25391 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMA1P25391 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LAMA1P25391 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMA1P25391 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMA1P25391 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.4■□□□□ 0.22
LAMA1P25391 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
LAMA1P25391 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.4■□□□□ 0.22
LAMA1P25391 RN7SL752P-201ENST00000463779 287 ntBASIC16.4■□□□□ 0.22
LAMA1P25391 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.4■□□□□ 0.22
LAMA1P25391 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.4■□□□□ 0.22
LAMA1P25391 COX11-210ENST00000639671 696 ntBASIC16.4■□□□□ 0.22
LAMA1P25391 AC087499.5-201ENST00000452760 1342 ntBASIC16.4■□□□□ 0.22
LAMA1P25391 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMA1P25391 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LAMA1P25391 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMA1P25391 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMA1P25391 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMA1P25391 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
LAMA1P25391 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LAMA1P25391 AC112492.5-201ENST00000421897 457 ntBASIC16.39■□□□□ 0.22
LAMA1P25391 IGHV3-62-201ENST00000520057 340 ntBASIC16.39■□□□□ 0.22
LAMA1P25391 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.39■□□□□ 0.22
LAMA1P25391 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
LAMA1P25391 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.39■□□□□ 0.21
LAMA1P25391 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LAMA1P25391 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LAMA1P25391 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LAMA1P25391 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMA1P25391 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.39■□□□□ 0.21
LAMA1P25391 AC139713.2-201ENST00000641328 2723 ntBASIC16.39■□□□□ 0.21
LAMA1P25391 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMA1P25391 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.39■□□□□ 0.21
LAMA1P25391 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LAMA1P25391 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.39■□□□□ 0.21
LAMA1P25391 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.39■□□□□ 0.21
LAMA1P25391 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.39■□□□□ 0.21
LAMA1P25391 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.39■□□□□ 0.21
LAMA1P25391 CHCHD2P3-201ENST00000603038 451 ntBASIC16.39■□□□□ 0.21
LAMA1P25391 AC008738.7-201ENST00000609744 511 ntBASIC16.39■□□□□ 0.21
LAMA1P25391 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMA1P25391 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LAMA1P25391 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LAMA1P25391 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMA1P25391 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.39■□□□□ 0.21
LAMA1P25391 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMA1P25391 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
LAMA1P25391 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LAMA1P25391 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMA1P25391 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMA1P25391 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LAMA1P25391 AC142381.1-201ENST00000426099 345 ntBASIC16.39■□□□□ 0.21
LAMA1P25391 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.39■□□□□ 0.21
LAMA1P25391 AC092552.1-201ENST00000547243 906 ntBASIC16.39■□□□□ 0.21
LAMA1P25391 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.39■□□□□ 0.21
LAMA1P25391 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.39■□□□□ 0.21
LAMA1P25391 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMA1P25391 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMA1P25391 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LAMA1P25391 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LAMA1P25391 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LAMA1P25391 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.38■□□□□ 0.21
LAMA1P25391 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
LAMA1P25391 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LAMA1P25391 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.38■□□□□ 0.21
LAMA1P25391 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMA1P25391 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMA1P25391 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.38■□□□□ 0.21
LAMA1P25391 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LAMA1P25391 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMA1P25391 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LAMA1P25391 RARRES2P9-201ENST00000565168 469 ntBASIC16.38■□□□□ 0.21
LAMA1P25391 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.38■□□□□ 0.21
LAMA1P25391 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LAMA1P25391 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LAMA1P25391 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
LAMA1P25391 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMA1P25391 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.38■□□□□ 0.21
LAMA1P25391 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LAMA1P25391 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMA1P25391 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMA1P25391 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.38■□□□□ 0.21
LAMA1P25391 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMA1P25391 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LAMA1P25391 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.38■□□□□ 0.21
LAMA1P25391 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
LAMA1P25391 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.38■□□□□ 0.21
LAMA1P25391 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
LAMA1P25391 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMA1P25391 AC135586.1-201ENST00000539323 574 ntBASIC16.38■□□□□ 0.21
LAMA1P25391 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LAMA1P25391 CTBP2P3-201ENST00000585629 1255 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms