Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RTN3O95197 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.89■□□□□ 0.45
RTN3O95197 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
RTN3O95197 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.89■□□□□ 0.45
RTN3O95197 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.89■□□□□ 0.45
RTN3O95197 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN3O95197 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.89■□□□□ 0.45
RTN3O95197 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.89■□□□□ 0.45
RTN3O95197 ACTL9-202ENST00000612068 1252 ntBASIC17.89■□□□□ 0.45
RTN3O95197 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RTN3O95197 AC103702.1-201ENST00000548801 2630 ntBASIC17.89■□□□□ 0.45
RTN3O95197 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RTN3O95197 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RTN3O95197 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN3O95197 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTN3O95197 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN3O95197 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN3O95197 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTN3O95197 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RTN3O95197 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTN3O95197 AC025580.3-201ENST00000617932 1424 ntBASIC17.89■□□□□ 0.45
RTN3O95197 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTN3O95197 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.88■□□□□ 0.45
RTN3O95197 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN3O95197 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN3O95197 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RTN3O95197 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN3O95197 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.88■□□□□ 0.45
RTN3O95197 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.88■□□□□ 0.45
RTN3O95197 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN3O95197 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
RTN3O95197 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN3O95197 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.88■□□□□ 0.45
RTN3O95197 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN3O95197 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
RTN3O95197 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RTN3O95197 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.88■□□□□ 0.45
RTN3O95197 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN3O95197 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
RTN3O95197 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.88■□□□□ 0.45
RTN3O95197 AL513480.1-201ENST00000451731 511 ntBASIC17.88■□□□□ 0.45
RTN3O95197 AC112482.1-201ENST00000492080 688 ntBASIC17.88■□□□□ 0.45
RTN3O95197 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.88■□□□□ 0.45
RTN3O95197 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.88■□□□□ 0.45
RTN3O95197 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN3O95197 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RTN3O95197 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
RTN3O95197 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN3O95197 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN3O95197 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RTN3O95197 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RTN3O95197 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN3O95197 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RTN3O95197 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RTN3O95197 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN3O95197 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN3O95197 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.88■□□□□ 0.45
RTN3O95197 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RTN3O95197 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTN3O95197 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN3O95197 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RTN3O95197 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTN3O95197 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN3O95197 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RTN3O95197 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RTN3O95197 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RTN3O95197 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN3O95197 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.87■□□□□ 0.45
RTN3O95197 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RTN3O95197 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RTN3O95197 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RTN3O95197 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN3O95197 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.87■□□□□ 0.45
RTN3O95197 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTN3O95197 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.87■□□□□ 0.45
RTN3O95197 AC107918.2-201ENST00000530817 355 ntBASIC17.87■□□□□ 0.45
RTN3O95197 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.87■□□□□ 0.45
RTN3O95197 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.87■□□□□ 0.45
RTN3O95197 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN3O95197 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.87■□□□□ 0.45
RTN3O95197 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.87■□□□□ 0.45
RTN3O95197 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN3O95197 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN3O95197 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RTN3O95197 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN3O95197 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTN3O95197 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.87■□□□□ 0.45
RTN3O95197 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.87■□□□□ 0.45
RTN3O95197 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN3O95197 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN3O95197 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTN3O95197 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.86■□□□□ 0.45
RTN3O95197 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RTN3O95197 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.86■□□□□ 0.45
RTN3O95197 AC068418.2-201ENST00000577309 3703 ntBASIC17.86■□□□□ 0.45
RTN3O95197 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms