Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.93■□□□□ 0.3
PHGDHO43175 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.93■□□□□ 0.3
PHGDHO43175 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.93■□□□□ 0.3
PHGDHO43175 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PHGDHO43175 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 ABCD1P5-201ENST00000445663 754 ntBASIC16.93■□□□□ 0.3
PHGDHO43175 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.93■□□□□ 0.3
PHGDHO43175 MIR5100-201ENST00000579544 119 ntBASIC16.93■□□□□ 0.3
PHGDHO43175 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.93■□□□□ 0.3
PHGDHO43175 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.93■□□□□ 0.3
PHGDHO43175 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.93■□□□□ 0.3
PHGDHO43175 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.93■□□□□ 0.3
PHGDHO43175 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.93■□□□□ 0.3
PHGDHO43175 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PHGDHO43175 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PHGDHO43175 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHGDHO43175 AL391256.1-201ENST00000443260 1855 ntBASIC16.93■□□□□ 0.3
PHGDHO43175 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHGDHO43175 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
PHGDHO43175 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
PHGDHO43175 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
PHGDHO43175 AC011270.2-201ENST00000624293 2550 ntBASIC16.92■□□□□ 0.3
PHGDHO43175 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PHGDHO43175 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PHGDHO43175 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHGDHO43175 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHGDHO43175 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
PHGDHO43175 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHGDHO43175 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PHGDHO43175 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHGDHO43175 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHGDHO43175 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHGDHO43175 LINC00982-205ENST00000420957 435 ntBASIC16.92■□□□□ 0.3
PHGDHO43175 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.92■□□□□ 0.3
PHGDHO43175 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.92■□□□□ 0.3
PHGDHO43175 KRT18P35-201ENST00000510488 1269 ntBASIC16.92■□□□□ 0.3
PHGDHO43175 DUX4L17-201ENST00000557360 1267 ntBASIC16.92■□□□□ 0.3
PHGDHO43175 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.92■□□□□ 0.3
PHGDHO43175 AC138894.3-201ENST00000603787 634 ntBASIC16.92■□□□□ 0.3
PHGDHO43175 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.92■□□□□ 0.3
PHGDHO43175 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.92■□□□□ 0.3
PHGDHO43175 SIGLEC16-201ENST00000599858 1437 ntBASIC16.92■□□□□ 0.3
PHGDHO43175 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.92■□□□□ 0.3
PHGDHO43175 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHGDHO43175 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.92■□□□□ 0.3
PHGDHO43175 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHGDHO43175 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.92■□□□□ 0.3
PHGDHO43175 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHGDHO43175 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.92■□□□□ 0.3
PHGDHO43175 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHGDHO43175 TUBB8P12-201ENST00000308911 1335 ntBASIC16.92■□□□□ 0.3
PHGDHO43175 TUBB7P-202ENST00000428444 1305 ntBASIC16.92■□□□□ 0.3
PHGDHO43175 TUBB8P7-204ENST00000567960 1332 ntBASIC16.92■□□□□ 0.3
PHGDHO43175 AC006449.5-201ENST00000610658 2098 ntBASIC16.92■□□□□ 0.3
PHGDHO43175 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.91■□□□□ 0.3
PHGDHO43175 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PHGDHO43175 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
PHGDHO43175 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.91■□□□□ 0.3
PHGDHO43175 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.91■□□□□ 0.3
PHGDHO43175 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.91■□□□□ 0.3
PHGDHO43175 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.91■□□□□ 0.3
PHGDHO43175 ATP5G2P1-201ENST00000433580 426 ntBASIC16.91■□□□□ 0.3
PHGDHO43175 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.91■□□□□ 0.3
PHGDHO43175 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.91■□□□□ 0.3
PHGDHO43175 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.91■□□□□ 0.3
PHGDHO43175 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHGDHO43175 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.91■□□□□ 0.3
PHGDHO43175 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.91■□□□□ 0.3
PHGDHO43175 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.91■□□□□ 0.3
PHGDHO43175 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PHGDHO43175 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms