Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.5□□□□□ -0.09
SDCBPO00560 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SDCBPO00560 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 CHCHD2P8-201ENST00000429873 447 ntBASIC14.5□□□□□ -0.09
SDCBPO00560 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.5□□□□□ -0.09
SDCBPO00560 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.5□□□□□ -0.09
SDCBPO00560 FAM86EP-206ENST00000510506 987 ntBASIC14.5□□□□□ -0.09
SDCBPO00560 IGHV3-52-201ENST00000519770 353 ntBASIC14.5□□□□□ -0.09
SDCBPO00560 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.5□□□□□ -0.09
SDCBPO00560 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.5□□□□□ -0.09
SDCBPO00560 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.5□□□□□ -0.09
SDCBPO00560 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SDCBPO00560 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDCBPO00560 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.49□□□□□ -0.09
SDCBPO00560 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SDCBPO00560 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.49□□□□□ -0.09
SDCBPO00560 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.49□□□□□ -0.09
SDCBPO00560 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SDCBPO00560 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.49□□□□□ -0.09
SDCBPO00560 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.49□□□□□ -0.09
SDCBPO00560 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.49□□□□□ -0.09
SDCBPO00560 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
SDCBPO00560 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SDCBPO00560 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
SDCBPO00560 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.49□□□□□ -0.09
SDCBPO00560 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.49□□□□□ -0.09
SDCBPO00560 AC109462.3-201ENST00000573934 613 ntBASIC14.49□□□□□ -0.09
SDCBPO00560 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.49□□□□□ -0.09
SDCBPO00560 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SDCBPO00560 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
SDCBPO00560 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SDCBPO00560 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SDCBPO00560 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SDCBPO00560 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.49□□□□□ -0.09
SDCBPO00560 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.49□□□□□ -0.09
SDCBPO00560 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.49□□□□□ -0.09
SDCBPO00560 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.49□□□□□ -0.09
SDCBPO00560 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 AC125634.1-201ENST00000438758 1403 ntBASIC14.49□□□□□ -0.09
SDCBPO00560 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDCBPO00560 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDCBPO00560 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDCBPO00560 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.48□□□□□ -0.09
SDCBPO00560 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDCBPO00560 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDCBPO00560 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
SDCBPO00560 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SDCBPO00560 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDCBPO00560 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SDCBPO00560 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDCBPO00560 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDCBPO00560 PAUPAR-201ENST00000630360 2965 ntBASIC14.48□□□□□ -0.09
SDCBPO00560 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SDCBPO00560 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.48□□□□□ -0.09
SDCBPO00560 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SDCBPO00560 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDCBPO00560 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDCBPO00560 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDCBPO00560 MYCLP1-201ENST00000372451 1075 ntBASIC14.48□□□□□ -0.09
SDCBPO00560 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms