Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 BICD1-207ENST00000551848 1962 ntBASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 IGLL3P-201ENST00000412472 434 ntBASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 MKNK2P1-201ENST00000437526 628 ntBASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 PDPK2P-202ENST00000562415 1191 ntBASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 AC023141.13-201ENST00000604991 943 ntBASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 AC004877.2-201ENST00000623941 599 ntBASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 AC010507.1-201ENST00000633895 436 ntBASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 AC092865.6-201ENST00000642101 219 ntBASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TSSC4Q9Y5U2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 AP006288.1-201ENST00000446065 395 ntBASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 SNHG9-202ENST00000564014 471 ntBASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 AL513190.1-201ENST00000621254 727 ntBASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TSSC4Q9Y5U2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.33□□□□□ -0.27
TSSC4Q9Y5U2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TSSC4Q9Y5U2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
TSSC4Q9Y5U2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
TSSC4Q9Y5U2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TSSC4Q9Y5U2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.33□□□□□ -0.27
TSSC4Q9Y5U2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TSSC4Q9Y5U2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
TSSC4Q9Y5U2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TSSC4Q9Y5U2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.33□□□□□ -0.28
TSSC4Q9Y5U2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TSSC4Q9Y5U2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TSSC4Q9Y5U2 AC067852.2-201ENST00000590513 2313 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms