Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGB3Q9Y5G1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB3Q9Y5G1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB3Q9Y5G1 AL603756.1-201ENST00000606511 2163 ntBASIC16.2■□□□□ 0.18
PCDHGB3Q9Y5G1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGB3Q9Y5G1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 BNIP3P18-201ENST00000593976 575 ntBASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 AL031008.1-201ENST00000619963 541 ntBASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 AD001527.2-201ENST00000622994 785 ntBASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 INTS4P1-201ENST00000438455 1935 ntBASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGB3Q9Y5G1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 DOC2GP-204ENST00000639052 2548 ntBASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 AC064862.7-201ENST00000604520 867 ntBASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGB3Q9Y5G1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 AC009336.1-201ENST00000608941 1553 ntBASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms