Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 AC073621.1-201ENST00000392730 636 ntBASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 TERC-201ENST00000602385 541 ntBASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 AC046158.3-201ENST00000624947 2558 ntBASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPH3AQ9Y2J0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 AC104109.2-201ENST00000602919 1418 ntBASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 PTCHD3P3-201ENST00000403073 906 ntBASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 RNA5SP415-201ENST00000517246 115 ntBASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPH3AQ9Y2J0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 RPS15P9-201ENST00000494093 319 ntBASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 IGHV3-22-201ENST00000520721 359 ntBASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms