Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 SPDYE7P-202ENST00000420373 878 ntBASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 AC142381.1-201ENST00000426099 345 ntBASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 RBPMS2P1-201ENST00000437762 623 ntBASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 UXT-AS1-201ENST00000590504 1525 ntBASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.4■□□□□ 0.7
SYNPO2Q9UMS6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.39■□□□□ 0.7
SYNPO2Q9UMS6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SYNPO2Q9UMS6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.39■□□□□ 0.7
SYNPO2Q9UMS6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 SLC25A39P2-201ENST00000537614 270 ntBASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 AC026150.2-201ENST00000564693 1156 ntBASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 AC106028.4-201ENST00000614509 607 ntBASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 Z92544.3-201ENST00000624747 417 ntBASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNPO2Q9UMS6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms