Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 RPSAP43-201ENST00000402237 625 ntBASIC18.09■□□□□ 0.49
SIX4Q9UIU6 GPX1P2-201ENST00000429271 606 ntBASIC18.09■□□□□ 0.49
SIX4Q9UIU6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 AC112482.1-201ENST00000492080 688 ntBASIC18.09■□□□□ 0.49
SIX4Q9UIU6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 MTDHP5-201ENST00000598980 586 ntBASIC18.09■□□□□ 0.49
SIX4Q9UIU6 AC068137.2-201ENST00000605408 478 ntBASIC18.09■□□□□ 0.49
SIX4Q9UIU6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SIX4Q9UIU6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SIX4Q9UIU6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.08■□□□□ 0.49
SIX4Q9UIU6 HTR7P1-202ENST00000624664 4411 ntBASIC18.08■□□□□ 0.49
SIX4Q9UIU6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SIX4Q9UIU6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SIX4Q9UIU6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SIX4Q9UIU6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SIX4Q9UIU6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SIX4Q9UIU6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SIX4Q9UIU6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.08■□□□□ 0.49
SIX4Q9UIU6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SIX4Q9UIU6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.08■□□□□ 0.49
SIX4Q9UIU6 AL391256.1-201ENST00000443260 1855 ntBASIC18.08■□□□□ 0.49
SIX4Q9UIU6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SIX4Q9UIU6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 AL671710.1-201ENST00000610245 2349 ntBASIC18.08■□□□□ 0.48
SIX4Q9UIU6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 UPF3AP3-201ENST00000420996 769 ntBASIC18.08■□□□□ 0.48
SIX4Q9UIU6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 AC140658.5-201ENST00000438532 169 ntBASIC18.08■□□□□ 0.48
SIX4Q9UIU6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 AL078644.1-201ENST00000609881 752 ntBASIC18.08■□□□□ 0.48
SIX4Q9UIU6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 AC078925.2-201ENST00000624013 1973 ntBASIC18.08■□□□□ 0.48
SIX4Q9UIU6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.08■□□□□ 0.48
SIX4Q9UIU6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 KRT18P13-201ENST00000400056 1290 ntBASIC18.07■□□□□ 0.48
SIX4Q9UIU6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 AC091812.2-201ENST00000619081 385 ntBASIC18.07■□□□□ 0.48
SIX4Q9UIU6 C20orf181-201ENST00000623918 480 ntBASIC18.07■□□□□ 0.48
SIX4Q9UIU6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX4Q9UIU6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms