Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HDAC6Q9UBN7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 RFPL4AP1-201ENST00000530883 850 ntBASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 AC007064.4-201ENST00000637740 555 ntBASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.21■□□□□ 0.67
HDAC6Q9UBN7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 CXCL1P1-201ENST00000502804 216 ntBASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 UBALD1-205ENST00000590891 2641 ntBASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC6Q9UBN7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 CYMP-203ENST00000474680 1263 ntBASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 AP002472.1-201ENST00000577490 586 ntBASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 LINC02084-201ENST00000606069 1096 ntBASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 REXO1L11P-201ENST00000620964 1927 ntBASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC6Q9UBN7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms