Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 AC098614.1-201ENST00000368528 745 ntBASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 TSSK5P-201ENST00000423978 907 ntBASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 AC092658.1-201ENST00000505836 891 ntBASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
UBE2OQ9C0C9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 MIR658-201ENST00000385210 100 ntBASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 AC087163.2-201ENST00000457299 853 ntBASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 ACA64.2-201ENST00000459014 129 ntBASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
UBE2OQ9C0C9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 AL162274.1-201ENST00000617191 1098 ntBASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2OQ9C0C9 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
UBE2OQ9C0C9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBE2OQ9C0C9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBE2OQ9C0C9 BX276092.7-203ENST00000637198 1536 ntBASIC18.64■□□□□ 0.58
UBE2OQ9C0C9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms