Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 FAM58DP-201ENST00000428076 619 ntBASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 RNA5SP421-201ENST00000516864 134 ntBASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 DUX4L17-201ENST00000557360 1267 ntBASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 AJ011932.1-201ENST00000621707 465 ntBASIC19.25■□□□□ 0.67
SYNGAP1Q96PV0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 AC092474.2-201ENST00000424288 719 ntBASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 GPS2P2-201ENST00000430745 888 ntBASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 AC109635.5-201ENST00000533593 962 ntBASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 DUX4L27-201ENST00000554796 1261 ntBASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 AL009183.1-201ENST00000603760 355 ntBASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.24■□□□□ 0.67
SYNGAP1Q96PV0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 AC012569.1-201ENST00000591191 1524 ntBASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 SPCS2P4-201ENST00000436160 681 ntBASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 AC069262.1-201ENST00000539058 672 ntBASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 MIR4745-201ENST00000577608 62 ntBASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGAP1Q96PV0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYNGAP1Q96PV0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNGAP1Q96PV0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNGAP1Q96PV0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNGAP1Q96PV0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNGAP1Q96PV0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNGAP1Q96PV0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYNGAP1Q96PV0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.22■□□□□ 0.67
SYNGAP1Q96PV0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.22■□□□□ 0.67
SYNGAP1Q96PV0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYNGAP1Q96PV0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.22■□□□□ 0.67
SYNGAP1Q96PV0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SYNGAP1Q96PV0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNGAP1Q96PV0 PMS2P4-201ENST00000412466 1052 ntBASIC19.22■□□□□ 0.67
SYNGAP1Q96PV0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.22■□□□□ 0.67
SYNGAP1Q96PV0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.22■□□□□ 0.67
SYNGAP1Q96PV0 KRT8P23-201ENST00000560090 1207 ntBASIC19.22■□□□□ 0.67
SYNGAP1Q96PV0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms