Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.12■□□□□ 0.17
COL21A1Q96P44 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.11■□□□□ 0.17
COL21A1Q96P44 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
COL21A1Q96P44 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.11■□□□□ 0.17
COL21A1Q96P44 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.11■□□□□ 0.17
COL21A1Q96P44 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.11■□□□□ 0.17
COL21A1Q96P44 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.11■□□□□ 0.17
COL21A1Q96P44 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.11■□□□□ 0.17
COL21A1Q96P44 STK19B-204ENST00000512515 211 ntBASIC16.11■□□□□ 0.17
COL21A1Q96P44 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.11■□□□□ 0.17
COL21A1Q96P44 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.11■□□□□ 0.17
COL21A1Q96P44 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.11■□□□□ 0.17
COL21A1Q96P44 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
COL21A1Q96P44 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
COL21A1Q96P44 MTDHP3-201ENST00000594186 672 ntBASIC16.11■□□□□ 0.17
COL21A1Q96P44 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.11■□□□□ 0.17
COL21A1Q96P44 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.11■□□□□ 0.17
COL21A1Q96P44 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
COL21A1Q96P44 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
COL21A1Q96P44 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL21A1Q96P44 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL21A1Q96P44 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.1■□□□□ 0.17
COL21A1Q96P44 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.1■□□□□ 0.17
COL21A1Q96P44 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL21A1Q96P44 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL21A1Q96P44 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.1■□□□□ 0.17
COL21A1Q96P44 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL21A1Q96P44 AKR1C7P-201ENST00000305623 895 ntBASIC16.1■□□□□ 0.17
COL21A1Q96P44 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.1■□□□□ 0.17
COL21A1Q96P44 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
COL21A1Q96P44 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.1■□□□□ 0.17
COL21A1Q96P44 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
COL21A1Q96P44 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.1■□□□□ 0.17
COL21A1Q96P44 AC008608.2-201ENST00000606089 416 ntBASIC16.1■□□□□ 0.17
COL21A1Q96P44 AL355877.3-201ENST00000622820 899 ntBASIC16.1■□□□□ 0.17
COL21A1Q96P44 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
COL21A1Q96P44 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL21A1Q96P44 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL21A1Q96P44 FER1L4-210ENST00000615531 5998 ntBASIC16.1■□□□□ 0.17
COL21A1Q96P44 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
COL21A1Q96P44 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL21A1Q96P44 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL21A1Q96P44 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
COL21A1Q96P44 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
COL21A1Q96P44 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL21A1Q96P44 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL21A1Q96P44 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.1■□□□□ 0.17
COL21A1Q96P44 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL21A1Q96P44 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL21A1Q96P44 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL21A1Q96P44 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL21A1Q96P44 FLJ38576-201ENST00000623820 2459 ntBASIC16.09■□□□□ 0.17
COL21A1Q96P44 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL21A1Q96P44 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL21A1Q96P44 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL21A1Q96P44 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL21A1Q96P44 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL21A1Q96P44 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL21A1Q96P44 AC004870.1-201ENST00000315132 882 ntBASIC16.09■□□□□ 0.17
COL21A1Q96P44 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 EMBP1-201ENST00000458200 901 ntBASIC16.09■□□□□ 0.17
COL21A1Q96P44 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.09■□□□□ 0.17
COL21A1Q96P44 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms