Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
CPNE2Q96FN4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 MIR600HG-201ENST00000449175 5984 ntBASIC14.84□□□□□ -0.03
CPNE2Q96FN4 AC106886.4-201ENST00000623557 2502 ntBASIC14.84□□□□□ -0.03
CPNE2Q96FN4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 AC009336.1-201ENST00000608941 1553 ntBASIC14.84□□□□□ -0.03
CPNE2Q96FN4 AL049757.1-201ENST00000616842 1596 ntBASIC14.84□□□□□ -0.03
CPNE2Q96FN4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 MST1L-201ENST00000442552 2185 ntBASIC14.84□□□□□ -0.03
CPNE2Q96FN4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE2Q96FN4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.83□□□□□ -0.03
CPNE2Q96FN4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.83□□□□□ -0.03
CPNE2Q96FN4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CPNE2Q96FN4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CPNE2Q96FN4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CPNE2Q96FN4 AL353593.2-201ENST00000602529 1483 ntBASIC14.83□□□□□ -0.03
CPNE2Q96FN4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
CPNE2Q96FN4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CPNE2Q96FN4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.83□□□□□ -0.03
CPNE2Q96FN4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 KLF4P1-201ENST00000412782 1185 ntBASIC14.83□□□□□ -0.04
CPNE2Q96FN4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE2Q96FN4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE2Q96FN4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.82□□□□□ -0.04
CPNE2Q96FN4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.82□□□□□ -0.04
CPNE2Q96FN4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.82□□□□□ -0.04
CPNE2Q96FN4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.82□□□□□ -0.04
CPNE2Q96FN4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE2Q96FN4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE2Q96FN4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE2Q96FN4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CPNE2Q96FN4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms