Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 MIR1233-2-201ENST00000408138 82 ntBASIC17.42■□□□□ 0.38
CCDC97Q96F63 MIR1233-1-201ENST00000408722 82 ntBASIC17.42■□□□□ 0.38
CCDC97Q96F63 KRT18P67-201ENST00000432816 1264 ntBASIC17.42■□□□□ 0.38
CCDC97Q96F63 AF238378.1-201ENST00000526806 358 ntBASIC17.42■□□□□ 0.38
CCDC97Q96F63 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 AL645608.8-201ENST00000606034 2086 ntBASIC17.41■□□□□ 0.38
CCDC97Q96F63 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 LYSMD4-203ENST00000378904 2122 ntBASIC17.41■□□□□ 0.38
CCDC97Q96F63 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC97Q96F63 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC97Q96F63 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC97Q96F63 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC97Q96F63 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC97Q96F63 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC97Q96F63 AC122714.2-201ENST00000502787 707 ntBASIC17.41■□□□□ 0.38
CCDC97Q96F63 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.41■□□□□ 0.38
CCDC97Q96F63 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC97Q96F63 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.41■□□□□ 0.38
CCDC97Q96F63 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC97Q96F63 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC97Q96F63 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC97Q96F63 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CCDC97Q96F63 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC97Q96F63 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC97Q96F63 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC97Q96F63 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC97Q96F63 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC97Q96F63 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC97Q96F63 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC97Q96F63 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC97Q96F63 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC97Q96F63 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC97Q96F63 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC97Q96F63 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC97Q96F63 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC97Q96F63 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
CCDC97Q96F63 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC97Q96F63 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC97Q96F63 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC97Q96F63 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC97Q96F63 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC97Q96F63 AL031284.1-201ENST00000419297 478 ntBASIC17.4■□□□□ 0.38
CCDC97Q96F63 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC97Q96F63 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC97Q96F63 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC97Q96F63 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC97Q96F63 AC092865.5-201ENST00000545435 363 ntBASIC17.4■□□□□ 0.38
CCDC97Q96F63 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC97Q96F63 AL591684.3-201ENST00000605187 298 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms