Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 PI4KAP1-204ENST00000612579 1703 ntBASIC20■□□□□ 0.79
BRF1Q92994 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
BRF1Q92994 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20■□□□□ 0.79
BRF1Q92994 AC004870.1-201ENST00000315132 882 ntBASIC20■□□□□ 0.79
BRF1Q92994 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20■□□□□ 0.79
BRF1Q92994 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20■□□□□ 0.79
BRF1Q92994 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20■□□□□ 0.79
BRF1Q92994 KRT18P67-201ENST00000432816 1264 ntBASIC20■□□□□ 0.79
BRF1Q92994 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
BRF1Q92994 MOK-208ENST00000519058 917 ntTSL 2 BASIC20■□□□□ 0.79
BRF1Q92994 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20■□□□□ 0.79
BRF1Q92994 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20■□□□□ 0.79
BRF1Q92994 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20■□□□□ 0.79
BRF1Q92994 AC012640.2-201ENST00000561606 901 ntBASIC20■□□□□ 0.79
BRF1Q92994 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20■□□□□ 0.79
BRF1Q92994 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20■□□□□ 0.79
BRF1Q92994 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
BRF1Q92994 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20■□□□□ 0.79
BRF1Q92994 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20■□□□□ 0.79
BRF1Q92994 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20■□□□□ 0.79
BRF1Q92994 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
BRF1Q92994 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20■□□□□ 0.79
BRF1Q92994 AC079328.2-201ENST00000561241 3354 ntBASIC20■□□□□ 0.79
BRF1Q92994 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
BRF1Q92994 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
BRF1Q92994 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BRF1Q92994 AL021920.2-201ENST00000624828 1351 ntBASIC19.99■□□□□ 0.79
BRF1Q92994 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
BRF1Q92994 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRF1Q92994 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.99■□□□□ 0.79
BRF1Q92994 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.99■□□□□ 0.79
BRF1Q92994 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.99■□□□□ 0.79
BRF1Q92994 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.99■□□□□ 0.79
BRF1Q92994 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.99■□□□□ 0.79
BRF1Q92994 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.99■□□□□ 0.79
BRF1Q92994 AC104692.2-201ENST00000603054 253 ntBASIC19.99■□□□□ 0.79
BRF1Q92994 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.99■□□□□ 0.79
BRF1Q92994 AL805961.1-202ENST00000641562 540 ntBASIC19.99■□□□□ 0.79
BRF1Q92994 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRF1Q92994 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
BRF1Q92994 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
BRF1Q92994 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRF1Q92994 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BRF1Q92994 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
BRF1Q92994 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BRF1Q92994 AL603756.1-201ENST00000606511 2163 ntBASIC19.98■□□□□ 0.79
BRF1Q92994 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BRF1Q92994 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BRF1Q92994 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.98■□□□□ 0.79
BRF1Q92994 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BRF1Q92994 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.98■□□□□ 0.79
BRF1Q92994 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BRF1Q92994 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
BRF1Q92994 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BRF1Q92994 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.98■□□□□ 0.79
BRF1Q92994 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.98■□□□□ 0.79
BRF1Q92994 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BRF1Q92994 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
BRF1Q92994 AC087163.2-201ENST00000457299 853 ntBASIC19.98■□□□□ 0.79
BRF1Q92994 AF186996.4-201ENST00000467186 377 ntBASIC19.98■□□□□ 0.79
BRF1Q92994 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.98■□□□□ 0.79
BRF1Q92994 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BRF1Q92994 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.98■□□□□ 0.79
BRF1Q92994 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.98■□□□□ 0.79
BRF1Q92994 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BRF1Q92994 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
BRF1Q92994 AC008735.5-201ENST00000623544 497 ntBASIC19.98■□□□□ 0.79
BRF1Q92994 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BRF1Q92994 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
BRF1Q92994 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.98■□□□□ 0.79
BRF1Q92994 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.98■□□□□ 0.79
BRF1Q92994 AP002414.3-201ENST00000589352 1468 ntBASIC19.98■□□□□ 0.79
BRF1Q92994 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.98■□□□□ 0.79
BRF1Q92994 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
BRF1Q92994 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BRF1Q92994 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BRF1Q92994 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BRF1Q92994 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
BRF1Q92994 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
BRF1Q92994 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
BRF1Q92994 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
BRF1Q92994 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BRF1Q92994 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BRF1Q92994 KRT8P49-201ENST00000604166 1432 ntBASIC19.97■□□□□ 0.79
BRF1Q92994 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.97■□□□□ 0.79
BRF1Q92994 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms