Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SHKBP1Q8TBC3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 AD000864.1-201ENST00000624076 2295 ntBASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHKBP1Q8TBC3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 AL355312.1-201ENST00000407115 2176 ntBASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 AC002056.1-201ENST00000395613 760 ntBASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 AC099522.2-201ENST00000607001 744 ntBASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHKBP1Q8TBC3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms