Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.96□□□□□ -0.01
LYSMD2Q8IV50 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD2Q8IV50 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.96□□□□□ -0.01
LYSMD2Q8IV50 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD2Q8IV50 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD2Q8IV50 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.96□□□□□ -0.01
LYSMD2Q8IV50 AC006058.3-201ENST00000606217 1069 ntBASIC14.96□□□□□ -0.01
LYSMD2Q8IV50 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD2Q8IV50 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.96□□□□□ -0.01
LYSMD2Q8IV50 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD2Q8IV50 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD2Q8IV50 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.96□□□□□ -0.01
LYSMD2Q8IV50 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
LYSMD2Q8IV50 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.96□□□□□ -0.01
LYSMD2Q8IV50 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LYSMD2Q8IV50 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LYSMD2Q8IV50 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
LYSMD2Q8IV50 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LYSMD2Q8IV50 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
LYSMD2Q8IV50 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
LYSMD2Q8IV50 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
LYSMD2Q8IV50 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 AC010240.3-201ENST00000607688 395 ntBASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 KRT8P47-201ENST00000604727 1398 ntBASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD2Q8IV50 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 BX276092.7-203ENST00000637198 1536 ntBASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 NUDT16P1-203ENST00000513809 620 ntBASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 AL353719.1-201ENST00000566847 864 ntBASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD2Q8IV50 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms