Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.05■□□□□ 0.48
RNF135Q8IUD6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 AC092919.2-201ENST00000623631 1645 ntBASIC18.05■□□□□ 0.48
RNF135Q8IUD6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF135Q8IUD6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 KRT18P55-202ENST00000578578 1546 ntBASIC18.04■□□□□ 0.48
RNF135Q8IUD6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 ADH5P3-201ENST00000433842 1137 ntBASIC18.04■□□□□ 0.48
RNF135Q8IUD6 FAM207CP-201ENST00000443486 507 ntBASIC18.04■□□□□ 0.48
RNF135Q8IUD6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 AC112191.1-201ENST00000523689 701 ntBASIC18.04■□□□□ 0.48
RNF135Q8IUD6 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 AL049757.1-201ENST00000616842 1596 ntBASIC18.04■□□□□ 0.48
RNF135Q8IUD6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF135Q8IUD6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 GNAS-203ENST00000306120 1878 ntBASIC18.03■□□□□ 0.48
RNF135Q8IUD6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 AC005237.2-201ENST00000434368 219 ntBASIC18.03■□□□□ 0.48
RNF135Q8IUD6 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RNF135Q8IUD6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 AC026120.1-201ENST00000611536 926 ntBASIC18.02■□□□□ 0.48
RNF135Q8IUD6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms