Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.11
CHMP1BQ7LBR1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP1BQ7LBR1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP1BQ7LBR1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP1BQ7LBR1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP1BQ7LBR1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP1BQ7LBR1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP1BQ7LBR1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP1BQ7LBR1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.77■□□□□ 0.11
CHMP1BQ7LBR1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
CHMP1BQ7LBR1 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP1BQ7LBR1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.77■□□□□ 0.11
CHMP1BQ7LBR1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.77■□□□□ 0.11
CHMP1BQ7LBR1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 AC011676.5-201ENST00000624864 2660 ntBASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 AL118508.1-201ENST00000613502 2345 ntBASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 NKILA-202ENST00000614771 2598 ntBASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 KLF4P1-201ENST00000412782 1185 ntBASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 AL020989.1-201ENST00000422979 469 ntBASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 NKAPP1-205ENST00000585790 367 ntBASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 AD001527.2-201ENST00000622994 785 ntBASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 TP73-AS1-207ENST00000624167 988 ntBASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
CHMP1BQ7LBR1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 PMPCAP1-201ENST00000508114 1576 ntBASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 AC003669.1-201ENST00000334569 611 ntBASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 MRPL3P1-201ENST00000400109 1033 ntBASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 AL031284.1-201ENST00000419297 478 ntBASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 SLC25A6P4-201ENST00000586535 553 ntBASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms