Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 AC064836.3-201ENST00000607928 673 ntBASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RFWD3Q6PCD5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 AL162727.3-201ENST00000635661 2787 ntBASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 CRYGEP-201ENST00000412192 528 ntBASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 AL591424.1-201ENST00000442569 1213 ntBASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 KRT18P2-201ENST00000447938 1258 ntBASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 PGAM5P1-201ENST00000518923 814 ntBASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD3Q6PCD5 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 VN2R19P-201ENST00000442399 1052 ntBASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms