Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 SPDYE19P-201ENST00000338590 713 ntBASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 MTND6P24-201ENST00000440466 518 ntBASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 AC135586.1-201ENST00000539323 574 ntBASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 KRT8P49-201ENST00000604166 1432 ntBASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 AP006294.1-201ENST00000415407 339 ntBASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 AC099568.2-201ENST00000609194 695 ntBASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 AC116353.5-201ENST00000638148 1699 ntBASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 AC009118.2-201ENST00000613275 655 ntBASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 TOP3BP1-201ENST00000420768 1380 ntBASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 MYCLP2-201ENST00000449268 967 ntBASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 AC061975.2-201ENST00000581722 295 ntBASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13DQ5THJ4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13DQ5THJ4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.23□□□□□ -0.61
VPS13DQ5THJ4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.23□□□□□ -0.61
VPS13DQ5THJ4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13DQ5THJ4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC11.23□□□□□ -0.61
VPS13DQ5THJ4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13DQ5THJ4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
VPS13DQ5THJ4 GIMAP3P-201ENST00000495150 836 ntBASIC11.23□□□□□ -0.61
VPS13DQ5THJ4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13DQ5THJ4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.23□□□□□ -0.61
VPS13DQ5THJ4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.23□□□□□ -0.61
VPS13DQ5THJ4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC11.23□□□□□ -0.61
VPS13DQ5THJ4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC11.23□□□□□ -0.61
VPS13DQ5THJ4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13DQ5THJ4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13DQ5THJ4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13DQ5THJ4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms