Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC073389.1-201ENST00000595595 795 ntBASIC20.23■□□□□ 0.83
PDS5AQ29RF7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.23■□□□□ 0.83
PDS5AQ29RF7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 IGHV3-62-201ENST00000520057 340 ntBASIC20.22■□□□□ 0.83
PDS5AQ29RF7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDS5AQ29RF7 AC020763.4-201ENST00000623414 4170 ntBASIC20.22■□□□□ 0.83
PDS5AQ29RF7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 AC027307.2-201ENST00000591252 911 ntBASIC20.21■□□□□ 0.83
PDS5AQ29RF7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.21■□□□□ 0.83
PDS5AQ29RF7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 AC142381.1-201ENST00000426099 345 ntBASIC20.2■□□□□ 0.82
PDS5AQ29RF7 SPDYE14P-201ENST00000442619 822 ntBASIC20.2■□□□□ 0.82
PDS5AQ29RF7 CNN2P2-201ENST00000443536 909 ntBASIC20.2■□□□□ 0.82
PDS5AQ29RF7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 CNN2P3-201ENST00000450201 906 ntBASIC20.2■□□□□ 0.82
PDS5AQ29RF7 AC067863.1-201ENST00000494933 530 ntBASIC20.2■□□□□ 0.82
PDS5AQ29RF7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 AC051619.7-201ENST00000568314 623 ntBASIC20.2■□□□□ 0.82
PDS5AQ29RF7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 AL136317.3-201ENST00000618497 906 ntBASIC20.2■□□□□ 0.82
PDS5AQ29RF7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms