Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.33■□□□□ 0.37
CDH4P55283 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH4P55283 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.33■□□□□ 0.37
CDH4P55283 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH4P55283 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.33■□□□□ 0.37
CDH4P55283 SLC22A20-204ENST00000530038 1673 ntBASIC17.33■□□□□ 0.37
CDH4P55283 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDH4P55283 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDH4P55283 AC012569.1-201ENST00000591191 1524 ntBASIC17.33■□□□□ 0.37
CDH4P55283 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH4P55283 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH4P55283 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.33■□□□□ 0.36
CDH4P55283 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH4P55283 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH4P55283 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.33■□□□□ 0.36
CDH4P55283 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH4P55283 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.33■□□□□ 0.36
CDH4P55283 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.33■□□□□ 0.36
CDH4P55283 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH4P55283 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
CDH4P55283 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.33■□□□□ 0.36
CDH4P55283 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH4P55283 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH4P55283 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH4P55283 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CDH4P55283 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CDH4P55283 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH4P55283 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH4P55283 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH4P55283 AC131009.4-201ENST00000624048 1740 ntBASIC17.33■□□□□ 0.36
CDH4P55283 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDH4P55283 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH4P55283 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH4P55283 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CDH4P55283 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH4P55283 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH4P55283 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH4P55283 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH4P55283 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH4P55283 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH4P55283 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH4P55283 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDH4P55283 AC087641.1-201ENST00000557561 1021 ntBASIC17.32■□□□□ 0.36
CDH4P55283 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.32■□□□□ 0.36
CDH4P55283 AP001350.2-201ENST00000625104 1094 ntBASIC17.32■□□□□ 0.36
CDH4P55283 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH4P55283 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH4P55283 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH4P55283 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
CDH4P55283 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH4P55283 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH4P55283 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH4P55283 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH4P55283 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH4P55283 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH4P55283 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH4P55283 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH4P55283 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH4P55283 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH4P55283 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH4P55283 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH4P55283 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH4P55283 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH4P55283 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH4P55283 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH4P55283 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CDH4P55283 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH4P55283 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH4P55283 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH4P55283 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH4P55283 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH4P55283 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH4P55283 KRT18P13-201ENST00000400056 1290 ntBASIC17.31■□□□□ 0.36
CDH4P55283 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CDH4P55283 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH4P55283 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.31■□□□□ 0.36
CDH4P55283 AP002490.2-201ENST00000524791 560 ntBASIC17.31■□□□□ 0.36
CDH4P55283 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH4P55283 MIR4492-201ENST00000581627 80 ntBASIC17.31■□□□□ 0.36
CDH4P55283 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.31■□□□□ 0.36
CDH4P55283 AC068137.2-201ENST00000605408 478 ntBASIC17.31■□□□□ 0.36
CDH4P55283 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH4P55283 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDH4P55283 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH4P55283 PKD1P1-201ENST00000458669 6805 ntBASIC17.31■□□□□ 0.36
CDH4P55283 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDH4P55283 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH4P55283 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CDH4P55283 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH4P55283 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH4P55283 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH4P55283 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH4P55283 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH4P55283 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH4P55283 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
CDH4P55283 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CDH4P55283 HMGA1P7-201ENST00000406908 502 ntBASIC17.3■□□□□ 0.36
CDH4P55283 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH4P55283 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.3■□□□□ 0.36
CDH4P55283 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms