Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPAP53621 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPAP53621 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPAP53621 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COPAP53621 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPAP53621 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPAP53621 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COPAP53621 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COPAP53621 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPAP53621 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPAP53621 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.58■□□□□ 0.4
COPAP53621 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.58■□□□□ 0.4
COPAP53621 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.58■□□□□ 0.4
COPAP53621 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
COPAP53621 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COPAP53621 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPAP53621 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
COPAP53621 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPAP53621 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.57■□□□□ 0.4
COPAP53621 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.57■□□□□ 0.4
COPAP53621 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPAP53621 AC097637.2-201ENST00000624096 1997 ntBASIC17.57■□□□□ 0.4
COPAP53621 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPAP53621 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPAP53621 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPAP53621 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.57■□□□□ 0.4
COPAP53621 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPAP53621 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
COPAP53621 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPAP53621 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.57■□□□□ 0.4
COPAP53621 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
COPAP53621 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPAP53621 CRYGEP-201ENST00000412192 528 ntBASIC17.57■□□□□ 0.4
COPAP53621 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.57■□□□□ 0.4
COPAP53621 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPAP53621 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPAP53621 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPAP53621 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.57■□□□□ 0.4
COPAP53621 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.57■□□□□ 0.4
COPAP53621 MIR4751-201ENST00000578027 74 ntBASIC17.57■□□□□ 0.4
COPAP53621 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.57■□□□□ 0.4
COPAP53621 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.57■□□□□ 0.4
COPAP53621 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.57■□□□□ 0.4
COPAP53621 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPAP53621 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPAP53621 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPAP53621 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.57■□□□□ 0.4
COPAP53621 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
COPAP53621 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPAP53621 AL138688.1-201ENST00000624851 1594 ntBASIC17.57■□□□□ 0.4
COPAP53621 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.57■□□□□ 0.4
COPAP53621 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPAP53621 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.57■□□□□ 0.4
COPAP53621 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPAP53621 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
COPAP53621 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
COPAP53621 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPAP53621 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.56■□□□□ 0.4
COPAP53621 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPAP53621 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.56■□□□□ 0.4
COPAP53621 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.56■□□□□ 0.4
COPAP53621 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.56■□□□□ 0.4
COPAP53621 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPAP53621 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPAP53621 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPAP53621 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.56■□□□□ 0.4
COPAP53621 CROCCP1-201ENST00000426910 5675 ntBASIC17.56■□□□□ 0.4
COPAP53621 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPAP53621 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.56■□□□□ 0.4
COPAP53621 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.56■□□□□ 0.4
COPAP53621 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPAP53621 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPAP53621 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPAP53621 VN2R19P-201ENST00000442399 1052 ntBASIC17.56■□□□□ 0.4
COPAP53621 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.56■□□□□ 0.4
COPAP53621 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.56■□□□□ 0.4
COPAP53621 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.56■□□□□ 0.4
COPAP53621 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.56■□□□□ 0.4
COPAP53621 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.56■□□□□ 0.4
COPAP53621 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPAP53621 MTDHP5-201ENST00000598980 586 ntBASIC17.56■□□□□ 0.4
COPAP53621 AC004790.2-201ENST00000623588 572 ntBASIC17.56■□□□□ 0.4
COPAP53621 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.56■□□□□ 0.4
COPAP53621 AL805961.1-202ENST00000641562 540 ntBASIC17.56■□□□□ 0.4
COPAP53621 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPAP53621 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPAP53621 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
COPAP53621 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPAP53621 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
COPAP53621 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.56■□□□□ 0.4
COPAP53621 AC018695.7-201ENST00000624587 2492 ntBASIC17.56■□□□□ 0.4
COPAP53621 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPAP53621 GPR89P-201ENST00000407924 1495 ntBASIC17.56■□□□□ 0.4
COPAP53621 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPAP53621 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
COPAP53621 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPAP53621 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPAP53621 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
COPAP53621 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.55■□□□□ 0.4
COPAP53621 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms