Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.77■□□□□ 0.28
CXCL12P48061 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CXCL12P48061 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CXCL12P48061 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CXCL12P48061 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.77■□□□□ 0.28
CXCL12P48061 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXCL12P48061 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.77■□□□□ 0.28
CXCL12P48061 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.77■□□□□ 0.28
CXCL12P48061 HILS1-202ENST00000545329 423 ntBASIC16.77■□□□□ 0.28
CXCL12P48061 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CXCL12P48061 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.77■□□□□ 0.28
CXCL12P48061 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.77■□□□□ 0.28
CXCL12P48061 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.77■□□□□ 0.28
CXCL12P48061 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.77■□□□□ 0.28
CXCL12P48061 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.77■□□□□ 0.28
CXCL12P48061 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.77■□□□□ 0.28
CXCL12P48061 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.77■□□□□ 0.28
CXCL12P48061 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CXCL12P48061 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CXCL12P48061 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
CXCL12P48061 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CXCL12P48061 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CXCL12P48061 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.77■□□□□ 0.27
CXCL12P48061 EGFEM1P-202ENST00000431685 1563 ntBASIC16.77■□□□□ 0.27
CXCL12P48061 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CXCL12P48061 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CXCL12P48061 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CXCL12P48061 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CXCL12P48061 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CXCL12P48061 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CXCL12P48061 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CXCL12P48061 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CXCL12P48061 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CXCL12P48061 AL138781.2-201ENST00000617896 1843 ntBASIC16.76■□□□□ 0.27
CXCL12P48061 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.76■□□□□ 0.27
CXCL12P48061 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.76■□□□□ 0.27
CXCL12P48061 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.76■□□□□ 0.27
CXCL12P48061 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.76■□□□□ 0.27
CXCL12P48061 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CXCL12P48061 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CXCL12P48061 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.76■□□□□ 0.27
CXCL12P48061 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.76■□□□□ 0.27
CXCL12P48061 CYP2A7P1-201ENST00000595391 815 ntBASIC16.76■□□□□ 0.27
CXCL12P48061 AC017083.2-201ENST00000608069 979 ntBASIC16.76■□□□□ 0.27
CXCL12P48061 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CXCL12P48061 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.76■□□□□ 0.27
CXCL12P48061 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CXCL12P48061 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CXCL12P48061 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CXCL12P48061 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CXCL12P48061 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CXCL12P48061 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.76■□□□□ 0.27
CXCL12P48061 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CXCL12P48061 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.75■□□□□ 0.27
CXCL12P48061 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXCL12P48061 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CXCL12P48061 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.75■□□□□ 0.27
CXCL12P48061 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CXCL12P48061 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXCL12P48061 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CXCL12P48061 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.75■□□□□ 0.27
CXCL12P48061 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXCL12P48061 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CXCL12P48061 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.75■□□□□ 0.27
CXCL12P48061 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXCL12P48061 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CXCL12P48061 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXCL12P48061 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXCL12P48061 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CXCL12P48061 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.75■□□□□ 0.27
CXCL12P48061 AC087499.6-201ENST00000411576 835 ntBASIC16.75■□□□□ 0.27
CXCL12P48061 AP006294.1-201ENST00000415407 339 ntBASIC16.75■□□□□ 0.27
CXCL12P48061 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.75■□□□□ 0.27
CXCL12P48061 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.75■□□□□ 0.27
CXCL12P48061 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.75■□□□□ 0.27
CXCL12P48061 PRYP6-201ENST00000514804 343 ntBASIC16.75■□□□□ 0.27
CXCL12P48061 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CXCL12P48061 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.75■□□□□ 0.27
CXCL12P48061 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
CXCL12P48061 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.75■□□□□ 0.27
CXCL12P48061 RN7SL828P-201ENST00000607615 303 ntBASIC16.75■□□□□ 0.27
CXCL12P48061 AL844908.2-201ENST00000609461 460 ntBASIC16.75■□□□□ 0.27
CXCL12P48061 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.75■□□□□ 0.27
CXCL12P48061 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.75■□□□□ 0.27
CXCL12P48061 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.75■□□□□ 0.27
CXCL12P48061 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.75■□□□□ 0.27
CXCL12P48061 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.75■□□□□ 0.27
CXCL12P48061 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.75■□□□□ 0.27
CXCL12P48061 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CXCL12P48061 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXCL12P48061 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CXCL12P48061 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.75■□□□□ 0.27
CXCL12P48061 AC093503.3-201ENST00000624917 2352 ntBASIC16.75■□□□□ 0.27
CXCL12P48061 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CXCL12P48061 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CXCL12P48061 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CXCL12P48061 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CXCL12P48061 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CXCL12P48061 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXCL12P48061 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms