Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH3P22223 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDH3P22223 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDH3P22223 IGHV3-22-201ENST00000520721 359 ntBASIC16.73■□□□□ 0.27
CDH3P22223 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH3P22223 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH3P22223 AC106730.1-201ENST00000566722 1090 ntBASIC16.73■□□□□ 0.27
CDH3P22223 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CDH3P22223 AL139327.4-201ENST00000612362 153 ntBASIC16.73■□□□□ 0.27
CDH3P22223 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDH3P22223 AC004706.3-202ENST00000621574 984 ntBASIC16.73■□□□□ 0.27
CDH3P22223 PGM5P2-202ENST00000637225 1043 ntBASIC16.73■□□□□ 0.27
CDH3P22223 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH3P22223 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH3P22223 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CDH3P22223 LINC00304-203ENST00000565008 1864 ntBASIC16.73■□□□□ 0.27
CDH3P22223 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDH3P22223 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
CDH3P22223 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH3P22223 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDH3P22223 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH3P22223 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CDH3P22223 AC046185.3-201ENST00000623228 1824 ntBASIC16.73■□□□□ 0.27
CDH3P22223 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDH3P22223 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 UBALD1-205ENST00000590891 2641 ntBASIC16.72■□□□□ 0.27
CDH3P22223 AC104109.2-201ENST00000602919 1418 ntBASIC16.72■□□□□ 0.27
CDH3P22223 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH3P22223 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH3P22223 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH3P22223 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 AC136632.2-201ENST00000512891 861 ntBASIC16.72■□□□□ 0.27
CDH3P22223 RNA5SP415-201ENST00000517246 115 ntBASIC16.72■□□□□ 0.27
CDH3P22223 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH3P22223 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH3P22223 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDH3P22223 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH3P22223 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CDH3P22223 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH3P22223 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDH3P22223 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH3P22223 AC117500.6-201ENST00000624871 588 ntBASIC16.72■□□□□ 0.27
CDH3P22223 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CDH3P22223 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH3P22223 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH3P22223 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
CDH3P22223 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH3P22223 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDH3P22223 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH3P22223 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH3P22223 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH3P22223 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDH3P22223 AL355312.1-201ENST00000407115 2176 ntBASIC16.71■□□□□ 0.27
CDH3P22223 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH3P22223 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
CDH3P22223 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDH3P22223 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH3P22223 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH3P22223 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDH3P22223 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDH3P22223 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms