Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 AC002056.1-201ENST00000395613 760 ntBASIC18.8■□□□□ 0.6
ATP4AP20648 AC004461.1-201ENST00000412461 403 ntBASIC18.8■□□□□ 0.6
ATP4AP20648 PMS2P2-201ENST00000425039 1128 ntBASIC18.8■□□□□ 0.6
ATP4AP20648 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP4AP20648 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.8■□□□□ 0.6
ATP4AP20648 AC124947.2-201ENST00000547118 1133 ntBASIC18.8■□□□□ 0.6
ATP4AP20648 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP4AP20648 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ATP4AP20648 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP4AP20648 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP4AP20648 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP4AP20648 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP4AP20648 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP4AP20648 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP4AP20648 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP4AP20648 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP4AP20648 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
ATP4AP20648 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP4AP20648 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ATP4AP20648 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP4AP20648 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP4AP20648 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP4AP20648 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP4AP20648 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATP4AP20648 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP4AP20648 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATP4AP20648 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP4AP20648 AL645608.8-201ENST00000606034 2086 ntBASIC18.79■□□□□ 0.6
ATP4AP20648 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP4AP20648 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP4AP20648 AC091167.2-201ENST00000579581 588 ntBASIC18.79■□□□□ 0.6
ATP4AP20648 MIR4492-201ENST00000581627 80 ntBASIC18.79■□□□□ 0.6
ATP4AP20648 AC022145.2-201ENST00000598203 171 ntBASIC18.79■□□□□ 0.6
ATP4AP20648 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP4AP20648 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP4AP20648 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ATP4AP20648 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP4AP20648 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ATP4AP20648 AC092068.3-201ENST00000587894 2016 ntBASIC18.79■□□□□ 0.6
ATP4AP20648 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ATP4AP20648 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP4AP20648 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP4AP20648 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP4AP20648 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP4AP20648 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP4AP20648 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP4AP20648 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP4AP20648 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP4AP20648 KRT18P28-201ENST00000453838 1332 ntBASIC18.78■□□□□ 0.6
ATP4AP20648 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP4AP20648 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATP4AP20648 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP4AP20648 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP4AP20648 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP4AP20648 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
ATP4AP20648 AC138932.1-201ENST00000534164 6830 ntBASIC18.78■□□□□ 0.6
ATP4AP20648 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP4AP20648 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP4AP20648 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP4AP20648 AL355306.1-201ENST00000415580 579 ntBASIC18.78■□□□□ 0.6
ATP4AP20648 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP4AP20648 KRT8P48-201ENST00000515599 1220 ntBASIC18.78■□□□□ 0.6
ATP4AP20648 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP4AP20648 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.78■□□□□ 0.6
ATP4AP20648 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATP4AP20648 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.78■□□□□ 0.6
ATP4AP20648 AL009183.1-201ENST00000603760 355 ntBASIC18.78■□□□□ 0.6
ATP4AP20648 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.78■□□□□ 0.6
ATP4AP20648 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP4AP20648 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATP4AP20648 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP4AP20648 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP4AP20648 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP4AP20648 AC108860.2-201ENST00000562760 2183 ntBASIC18.78■□□□□ 0.6
ATP4AP20648 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP4AP20648 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP4AP20648 AC131009.4-201ENST00000624048 1740 ntBASIC18.77■□□□□ 0.6
ATP4AP20648 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP4AP20648 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP4AP20648 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP4AP20648 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.77■□□□□ 0.6
ATP4AP20648 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ATP4AP20648 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP4AP20648 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP4AP20648 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ATP4AP20648 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP4AP20648 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP4AP20648 AL139400.1-201ENST00000366220 510 ntBASIC18.77■□□□□ 0.6
ATP4AP20648 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.77■□□□□ 0.6
ATP4AP20648 HCG4-201ENST00000418983 998 ntBASIC18.77■□□□□ 0.6
ATP4AP20648 AC092474.2-201ENST00000424288 719 ntBASIC18.77■□□□□ 0.6
ATP4AP20648 AL671277.1-201ENST00000429656 993 ntBASIC18.77■□□□□ 0.6
ATP4AP20648 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.77■□□□□ 0.6
ATP4AP20648 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ATP4AP20648 AP000344.2-201ENST00000512987 629 ntBASIC18.77■□□□□ 0.6
ATP4AP20648 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.77■□□□□ 0.6
ATP4AP20648 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.77■□□□□ 0.6
ATP4AP20648 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP4AP20648 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.77■□□□□ 0.6
ATP4AP20648 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms