Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 AP002472.1-201ENST00000577490 586 ntBASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 AP001160.2-201ENST00000596071 487 ntBASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 AC079781.4-201ENST00000641908 219 ntBASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 ELL2P1-201ENST00000413990 1906 ntBASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRGAP2CP0DJJ0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 DNAJB3-202ENST00000449667 1266 ntBASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 AC005412.3-201ENST00000580309 715 ntBASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 MIR4515-201ENST00000584082 81 ntBASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 AL645728.2-201ENST00000641974 660 ntBASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRGAP2CP0DJJ0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.64■□□□□ 0.58
SRGAP2CP0DJJ0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SRGAP2CP0DJJ0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.64■□□□□ 0.58
SRGAP2CP0DJJ0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 AL023806.1-201ENST00000603994 1649 ntBASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 AC092183.1-201ENST00000469884 875 ntBASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 AC092902.6-201ENST00000641783 218 ntBASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 TOP3BP1-201ENST00000420768 1380 ntBASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRGAP2CP0DJJ0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms