Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
COL1A1P02452 AL138918.1-201ENST00000568306 659 ntBASIC20.28■□□□□ 0.84
COL1A1P02452 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL1A1P02452 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.28■□□□□ 0.84
COL1A1P02452 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
COL1A1P02452 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
COL1A1P02452 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
COL1A1P02452 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL1A1P02452 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL1A1P02452 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL1A1P02452 PCDHB17P-201ENST00000539533 2393 ntBASIC20.27■□□□□ 0.84
COL1A1P02452 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL1A1P02452 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL1A1P02452 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL1A1P02452 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL1A1P02452 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL1A1P02452 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL1A1P02452 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.27■□□□□ 0.84
COL1A1P02452 MIR661-201ENST00000384842 89 ntBASIC20.27■□□□□ 0.84
COL1A1P02452 MIR943-201ENST00000401286 94 ntBASIC20.27■□□□□ 0.84
COL1A1P02452 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.27■□□□□ 0.84
COL1A1P02452 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.27■□□□□ 0.84
COL1A1P02452 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.27■□□□□ 0.84
COL1A1P02452 AC005225.4-201ENST00000557330 545 ntBASIC20.27■□□□□ 0.84
COL1A1P02452 KRT8P23-201ENST00000560090 1207 ntBASIC20.27■□□□□ 0.84
COL1A1P02452 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.27■□□□□ 0.84
COL1A1P02452 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
COL1A1P02452 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL1A1P02452 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL1A1P02452 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL1A1P02452 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.27■□□□□ 0.83
COL1A1P02452 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.27■□□□□ 0.83
COL1A1P02452 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.27■□□□□ 0.83
COL1A1P02452 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
COL1A1P02452 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL1A1P02452 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL1A1P02452 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL1A1P02452 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL1A1P02452 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL1A1P02452 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COL1A1P02452 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL1A1P02452 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL1A1P02452 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL1A1P02452 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL1A1P02452 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.26■□□□□ 0.83
COL1A1P02452 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.26■□□□□ 0.83
COL1A1P02452 AC005034.1-201ENST00000426657 489 ntBASIC20.26■□□□□ 0.83
COL1A1P02452 RBPMS2P1-201ENST00000437762 623 ntBASIC20.26■□□□□ 0.83
COL1A1P02452 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.26■□□□□ 0.83
COL1A1P02452 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.26■□□□□ 0.83
COL1A1P02452 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL1A1P02452 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.26■□□□□ 0.83
COL1A1P02452 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.26■□□□□ 0.83
COL1A1P02452 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.26■□□□□ 0.83
COL1A1P02452 AC026150.2-201ENST00000564693 1156 ntBASIC20.26■□□□□ 0.83
COL1A1P02452 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.26■□□□□ 0.83
COL1A1P02452 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.26■□□□□ 0.83
COL1A1P02452 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL1A1P02452 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL1A1P02452 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COL1A1P02452 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.26■□□□□ 0.83
COL1A1P02452 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COL1A1P02452 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL1A1P02452 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL1A1P02452 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COL1A1P02452 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL1A1P02452 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.26■□□□□ 0.83
COL1A1P02452 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL1A1P02452 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COL1A1P02452 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL1A1P02452 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL1A1P02452 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL1A1P02452 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL1A1P02452 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL1A1P02452 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.25■□□□□ 0.83
COL1A1P02452 SPDYE7P-202ENST00000420373 878 ntBASIC20.25■□□□□ 0.83
COL1A1P02452 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.25■□□□□ 0.83
COL1A1P02452 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.25■□□□□ 0.83
COL1A1P02452 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.25■□□□□ 0.83
COL1A1P02452 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.25■□□□□ 0.83
COL1A1P02452 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL1A1P02452 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.25■□□□□ 0.83
COL1A1P02452 AC008267.7-201ENST00000624570 1194 ntBASIC20.25■□□□□ 0.83
COL1A1P02452 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL1A1P02452 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL1A1P02452 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
COL1A1P02452 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.25■□□□□ 0.83
COL1A1P02452 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL1A1P02452 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COL1A1P02452 UXT-AS1-201ENST00000590504 1525 ntBASIC20.25■□□□□ 0.83
COL1A1P02452 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COL1A1P02452 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.25■□□□□ 0.83
COL1A1P02452 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
COL1A1P02452 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
COL1A1P02452 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL1A1P02452 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL1A1P02452 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL1A1P02452 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
COL1A1P02452 TUBB8P12-201ENST00000308911 1335 ntBASIC20.25■□□□□ 0.83
COL1A1P02452 TUBB7P-202ENST00000428444 1305 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms