Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.54■□□□□ 0.24
TNFP01375 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.54■□□□□ 0.24
TNFP01375 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.54■□□□□ 0.24
TNFP01375 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFP01375 RN7SL589P-201ENST00000481268 310 ntBASIC16.54■□□□□ 0.24
TNFP01375 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFP01375 MPDU1-223ENST00000582151 728 ntBASIC16.54■□□□□ 0.24
TNFP01375 AL355385.1-201ENST00000606123 409 ntBASIC16.54■□□□□ 0.24
TNFP01375 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TNFP01375 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFP01375 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFP01375 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.54■□□□□ 0.24
TNFP01375 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.54■□□□□ 0.24
TNFP01375 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TNFP01375 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.54■□□□□ 0.24
TNFP01375 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFP01375 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TNFP01375 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TNFP01375 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.53■□□□□ 0.24
TNFP01375 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TNFP01375 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TNFP01375 LINC02012-201ENST00000608206 1725 ntBASIC16.53■□□□□ 0.24
TNFP01375 AC131009.4-201ENST00000624048 1740 ntBASIC16.53■□□□□ 0.24
TNFP01375 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFP01375 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TNFP01375 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFP01375 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.53■□□□□ 0.24
TNFP01375 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.53■□□□□ 0.24
TNFP01375 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TNFP01375 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.53■□□□□ 0.24
TNFP01375 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TNFP01375 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TNFP01375 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFP01375 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFP01375 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TNFP01375 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.53■□□□□ 0.24
TNFP01375 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TNFP01375 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TNFP01375 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TNFP01375 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFP01375 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.53■□□□□ 0.24
TNFP01375 AC092474.2-201ENST00000424288 719 ntBASIC16.53■□□□□ 0.24
TNFP01375 AC005237.2-201ENST00000434368 219 ntBASIC16.53■□□□□ 0.24
TNFP01375 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.53■□□□□ 0.24
TNFP01375 AL592309.1-201ENST00000443127 649 ntBASIC16.53■□□□□ 0.24
TNFP01375 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.53■□□□□ 0.24
TNFP01375 AC023141.5-201ENST00000458585 616 ntBASIC16.53■□□□□ 0.24
TNFP01375 KRT8P48-201ENST00000515599 1220 ntBASIC16.53■□□□□ 0.24
TNFP01375 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
TNFP01375 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TNFP01375 DUX4L17-201ENST00000557360 1267 ntBASIC16.53■□□□□ 0.24
TNFP01375 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.53■□□□□ 0.24
TNFP01375 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFP01375 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.53■□□□□ 0.24
TNFP01375 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.53■□□□□ 0.24
TNFP01375 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.53■□□□□ 0.24
TNFP01375 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.53■□□□□ 0.24
TNFP01375 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFP01375 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TNFP01375 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFP01375 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.53■□□□□ 0.24
TNFP01375 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFP01375 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.53■□□□□ 0.24
TNFP01375 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFP01375 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.53■□□□□ 0.24
TNFP01375 OR6D1P-203ENST00000641209 4860 ntBASIC16.53■□□□□ 0.24
TNFP01375 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFP01375 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TNFP01375 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.53■□□□□ 0.24
TNFP01375 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.53■□□□□ 0.24
TNFP01375 SLC22A20-204ENST00000530038 1673 ntBASIC16.53■□□□□ 0.24
TNFP01375 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TNFP01375 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFP01375 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TNFP01375 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TNFP01375 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TNFP01375 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TNFP01375 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.52■□□□□ 0.24
TNFP01375 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.52■□□□□ 0.24
TNFP01375 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
TNFP01375 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFP01375 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.52■□□□□ 0.24
TNFP01375 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TNFP01375 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFP01375 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFP01375 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TNFP01375 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.52■□□□□ 0.24
TNFP01375 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.52■□□□□ 0.24
TNFP01375 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.52■□□□□ 0.24
TNFP01375 AC109635.5-201ENST00000533593 962 ntBASIC16.52■□□□□ 0.24
TNFP01375 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.52■□□□□ 0.24
TNFP01375 AC124947.2-201ENST00000547118 1133 ntBASIC16.52■□□□□ 0.24
TNFP01375 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.52■□□□□ 0.24
TNFP01375 AL135744.1-201ENST00000565098 629 ntBASIC16.52■□□□□ 0.24
TNFP01375 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.52■□□□□ 0.24
TNFP01375 AL031055.1-201ENST00000606362 631 ntBASIC16.52■□□□□ 0.24
TNFP01375 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.52■□□□□ 0.24
TNFP01375 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.52■□□□□ 0.24
TNFP01375 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFP01375 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms