Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CSPG5O95196 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG5O95196 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CSPG5O95196 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CSPG5O95196 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CSPG5O95196 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG5O95196 MIR661-201ENST00000384842 89 ntBASIC18.26■□□□□ 0.51
CSPG5O95196 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG5O95196 TFAMP1-201ENST00000412727 736 ntBASIC18.26■□□□□ 0.51
CSPG5O95196 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG5O95196 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG5O95196 AC002472.2-201ENST00000442739 958 ntBASIC18.26■□□□□ 0.51
CSPG5O95196 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.26■□□□□ 0.51
CSPG5O95196 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG5O95196 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.26■□□□□ 0.51
CSPG5O95196 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG5O95196 DUX4L17-201ENST00000557360 1267 ntBASIC18.26■□□□□ 0.51
CSPG5O95196 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.26■□□□□ 0.51
CSPG5O95196 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG5O95196 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG5O95196 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.26■□□□□ 0.51
CSPG5O95196 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG5O95196 UXT-AS1-201ENST00000590504 1525 ntBASIC18.26■□□□□ 0.51
CSPG5O95196 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG5O95196 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG5O95196 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG5O95196 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG5O95196 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG5O95196 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG5O95196 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG5O95196 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG5O95196 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG5O95196 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG5O95196 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG5O95196 FO538757.1-201ENST00000623083 1397 ntBASIC18.26■□□□□ 0.51
CSPG5O95196 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG5O95196 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG5O95196 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG5O95196 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.26■□□□□ 0.51
CSPG5O95196 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CSPG5O95196 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 TUBB3P1-201ENST00000405796 1332 ntBASIC18.25■□□□□ 0.51
CSPG5O95196 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.25■□□□□ 0.51
CSPG5O95196 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CSPG5O95196 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.25■□□□□ 0.51
CSPG5O95196 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.25■□□□□ 0.51
CSPG5O95196 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CSPG5O95196 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CSPG5O95196 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CSPG5O95196 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.25■□□□□ 0.51
CSPG5O95196 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 TSPY16P-201ENST00000449843 468 ntBASIC18.25■□□□□ 0.51
CSPG5O95196 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 AC069335.1-201ENST00000489972 472 ntBASIC18.25■□□□□ 0.51
CSPG5O95196 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.25■□□□□ 0.51
CSPG5O95196 TERF1P3-201ENST00000505638 1227 ntBASIC18.25■□□□□ 0.51
CSPG5O95196 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CSPG5O95196 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.25■□□□□ 0.51
CSPG5O95196 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 AC012645.4-201ENST00000610691 1061 ntBASIC18.25■□□□□ 0.51
CSPG5O95196 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.25■□□□□ 0.51
CSPG5O95196 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CSPG5O95196 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.25■□□□□ 0.51
CSPG5O95196 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CSPG5O95196 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.25■□□□□ 0.51
CSPG5O95196 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CSPG5O95196 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.25■□□□□ 0.51
CSPG5O95196 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG5O95196 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG5O95196 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG5O95196 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CSPG5O95196 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.24■□□□□ 0.51
CSPG5O95196 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.24■□□□□ 0.51
CSPG5O95196 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG5O95196 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG5O95196 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG5O95196 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.24■□□□□ 0.51
CSPG5O95196 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CSPG5O95196 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG5O95196 AC055876.3-201ENST00000431496 288 ntBASIC18.24■□□□□ 0.51
CSPG5O95196 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.24■□□□□ 0.51
CSPG5O95196 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.24■□□□□ 0.51
CSPG5O95196 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
CSPG5O95196 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.24■□□□□ 0.51
CSPG5O95196 AC138649.4-201ENST00000612222 287 ntBASIC18.24■□□□□ 0.51
CSPG5O95196 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms