Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.51■□□□□ 0.39
TSPAN3O60637 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN3O60637 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN3O60637 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN3O60637 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TSPAN3O60637 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TSPAN3O60637 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN3O60637 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN3O60637 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN3O60637 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.51■□□□□ 0.39
TSPAN3O60637 AC092053.1-201ENST00000605787 1936 ntBASIC17.51■□□□□ 0.39
TSPAN3O60637 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.5■□□□□ 0.39
TSPAN3O60637 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.5■□□□□ 0.39
TSPAN3O60637 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.5■□□□□ 0.39
TSPAN3O60637 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
TSPAN3O60637 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
TSPAN3O60637 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TSPAN3O60637 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TSPAN3O60637 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TSPAN3O60637 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.5■□□□□ 0.39
TSPAN3O60637 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
TSPAN3O60637 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.5■□□□□ 0.39
TSPAN3O60637 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.5■□□□□ 0.39
TSPAN3O60637 REXO1L3P-201ENST00000622202 1288 ntBASIC17.5■□□□□ 0.39
TSPAN3O60637 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.5■□□□□ 0.39
TSPAN3O60637 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.5■□□□□ 0.39
TSPAN3O60637 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 FRMD8P1-201ENST00000440433 1524 ntBASIC17.5■□□□□ 0.39
TSPAN3O60637 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.5■□□□□ 0.39
TSPAN3O60637 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.5■□□□□ 0.39
TSPAN3O60637 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TSPAN3O60637 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.5■□□□□ 0.39
TSPAN3O60637 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN3O60637 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.49■□□□□ 0.39
TSPAN3O60637 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.49■□□□□ 0.39
TSPAN3O60637 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN3O60637 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN3O60637 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN3O60637 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN3O60637 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.49■□□□□ 0.39
TSPAN3O60637 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TSPAN3O60637 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TSPAN3O60637 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN3O60637 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.49■□□□□ 0.39
TSPAN3O60637 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN3O60637 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN3O60637 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN3O60637 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.49■□□□□ 0.39
TSPAN3O60637 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.49■□□□□ 0.39
TSPAN3O60637 HTR5BP-201ENST00000430851 1154 ntBASIC17.49■□□□□ 0.39
TSPAN3O60637 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.49■□□□□ 0.39
TSPAN3O60637 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.49■□□□□ 0.39
TSPAN3O60637 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN3O60637 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.49■□□□□ 0.39
TSPAN3O60637 MIR4469-201ENST00000583919 79 ntBASIC17.49■□□□□ 0.39
TSPAN3O60637 C20orf181-201ENST00000623918 480 ntBASIC17.49■□□□□ 0.39
TSPAN3O60637 AC134684.3-201ENST00000641758 218 ntBASIC17.49■□□□□ 0.39
TSPAN3O60637 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.49■□□□□ 0.39
TSPAN3O60637 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.49■□□□□ 0.39
TSPAN3O60637 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
TSPAN3O60637 AC092919.2-201ENST00000623631 1645 ntBASIC17.49■□□□□ 0.39
TSPAN3O60637 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TSPAN3O60637 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TSPAN3O60637 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN3O60637 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN3O60637 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN3O60637 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN3O60637 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.49■□□□□ 0.39
TSPAN3O60637 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TSPAN3O60637 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN3O60637 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN3O60637 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN3O60637 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN3O60637 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN3O60637 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.48■□□□□ 0.39
TSPAN3O60637 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.48■□□□□ 0.39
TSPAN3O60637 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms