Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCA5O60264 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCA5O60264 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SMARCA5O60264 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.96■□□□□ 0.95
SMARCA5O60264 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCA5O60264 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.96■□□□□ 0.95
SMARCA5O60264 FDX1P1-201ENST00000449115 551 ntBASIC20.96■□□□□ 0.95
SMARCA5O60264 IGHV3-65-201ENST00000523210 341 ntBASIC20.96■□□□□ 0.95
SMARCA5O60264 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.96■□□□□ 0.95
SMARCA5O60264 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.96■□□□□ 0.95
SMARCA5O60264 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.96■□□□□ 0.95
SMARCA5O60264 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.96■□□□□ 0.95
SMARCA5O60264 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.96■□□□□ 0.95
SMARCA5O60264 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.96■□□□□ 0.95
SMARCA5O60264 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.96■□□□□ 0.95
SMARCA5O60264 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.96■□□□□ 0.95
SMARCA5O60264 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SMARCA5O60264 OR7E47P-204ENST00000575924 449 ntBASIC20.96■□□□□ 0.95
SMARCA5O60264 AC008667.4-201ENST00000607370 168 ntBASIC20.96■□□□□ 0.95
SMARCA5O60264 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCA5O60264 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SMARCA5O60264 REXO1L3P-201ENST00000622202 1288 ntBASIC20.96■□□□□ 0.95
SMARCA5O60264 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCA5O60264 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCA5O60264 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SMARCA5O60264 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCA5O60264 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCA5O60264 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.96■□□□□ 0.95
SMARCA5O60264 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCA5O60264 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.96■□□□□ 0.95
SMARCA5O60264 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.96■□□□□ 0.95
SMARCA5O60264 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.96■□□□□ 0.95
SMARCA5O60264 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCA5O60264 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
SMARCA5O60264 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SMARCA5O60264 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCA5O60264 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
SMARCA5O60264 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCA5O60264 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCA5O60264 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCA5O60264 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCA5O60264 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCA5O60264 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SMARCA5O60264 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.95■□□□□ 0.94
SMARCA5O60264 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCA5O60264 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCA5O60264 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.95■□□□□ 0.94
SMARCA5O60264 AC108073.2-201ENST00000464002 357 ntBASIC20.95■□□□□ 0.94
SMARCA5O60264 AC079776.4-201ENST00000511039 504 ntBASIC20.95■□□□□ 0.94
SMARCA5O60264 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.95■□□□□ 0.94
SMARCA5O60264 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.95■□□□□ 0.94
SMARCA5O60264 MIR1199-201ENST00000621445 119 ntBASIC20.95■□□□□ 0.94
SMARCA5O60264 AC004790.2-201ENST00000623588 572 ntBASIC20.95■□□□□ 0.94
SMARCA5O60264 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCA5O60264 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCA5O60264 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCA5O60264 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
SMARCA5O60264 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCA5O60264 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SMARCA5O60264 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.94■□□□□ 0.94
SMARCA5O60264 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
SMARCA5O60264 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
SMARCA5O60264 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
SMARCA5O60264 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 RPS2P28-201ENST00000314255 741 ntBASIC20.94■□□□□ 0.94
SMARCA5O60264 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SMARCA5O60264 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.94■□□□□ 0.94
SMARCA5O60264 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.94■□□□□ 0.94
SMARCA5O60264 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
SMARCA5O60264 AC107918.2-201ENST00000530817 355 ntBASIC20.94■□□□□ 0.94
SMARCA5O60264 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.94■□□□□ 0.94
SMARCA5O60264 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.94■□□□□ 0.94
SMARCA5O60264 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.94■□□□□ 0.94
SMARCA5O60264 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.94■□□□□ 0.94
SMARCA5O60264 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.94■□□□□ 0.94
SMARCA5O60264 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.94■□□□□ 0.94
SMARCA5O60264 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.94■□□□□ 0.94
SMARCA5O60264 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.94■□□□□ 0.94
SMARCA5O60264 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SMARCA5O60264 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SMARCA5O60264 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.94■□□□□ 0.94
SMARCA5O60264 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCA5O60264 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms