Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 AC124947.2-201ENST00000547118 1133 ntBASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
RHBDD3Q9Y3P4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RHBDD3Q9Y3P4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
RHBDD3Q9Y3P4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 AC132938.5-201ENST00000624980 1813 ntBASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 AC012615.1-201ENST00000565797 1299 ntBASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 AD001527.2-201ENST00000622994 785 ntBASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 PCDH8P1-201ENST00000428983 2773 ntBASIC14.95□□□□□ -0.02
RHBDD3Q9Y3P4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 AC092171.3-201ENST00000610122 2651 ntBASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 STK19B-204ENST00000512515 211 ntBASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 AC099336.1-202ENST00000602961 463 ntBASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 AC114341.1-201ENST00000618070 349 ntBASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RHBDD3Q9Y3P4 DOC2GP-204ENST00000639052 2548 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms