Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 AC087641.1-201ENST00000557561 1021 ntBASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 AP001350.2-201ENST00000625104 1094 ntBASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 AC134684.3-201ENST00000641758 218 ntBASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN1Q9UMX0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 AC002056.1-201ENST00000395613 760 ntBASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 CEND1P1-201ENST00000451006 455 ntBASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 AC131009.4-201ENST00000624048 1740 ntBASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 AC079781.4-201ENST00000641908 219 ntBASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.19■□□□□ 0.5
UBQLN1Q9UMX0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 AP006288.1-201ENST00000446065 395 ntBASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 AC092902.6-201ENST00000641783 218 ntBASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
UBQLN1Q9UMX0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 AC108860.2-201ENST00000562760 2183 ntBASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN1Q9UMX0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms