Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.95■□□□□ 0.3
TREX1Q9NSU2 PI4KAP1-204ENST00000612579 1703 ntBASIC16.95■□□□□ 0.3
TREX1Q9NSU2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.95■□□□□ 0.3
TREX1Q9NSU2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TREX1Q9NSU2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TREX1Q9NSU2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TREX1Q9NSU2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TREX1Q9NSU2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TREX1Q9NSU2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.95■□□□□ 0.3
TREX1Q9NSU2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TREX1Q9NSU2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.95■□□□□ 0.3
TREX1Q9NSU2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 AC018712.1-201ENST00000455767 687 ntBASIC16.94■□□□□ 0.3
TREX1Q9NSU2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 RNPS1P1-201ENST00000507437 918 ntBASIC16.94■□□□□ 0.3
TREX1Q9NSU2 OR7E14P-202ENST00000530490 1290 ntBASIC16.94■□□□□ 0.3
TREX1Q9NSU2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 AL121912.1-201ENST00000603683 238 ntBASIC16.94■□□□□ 0.3
TREX1Q9NSU2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 AC006538.1-201ENST00000567905 1585 ntBASIC16.94■□□□□ 0.3
TREX1Q9NSU2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TREX1Q9NSU2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 HNRNPDP1-201ENST00000439535 754 ntBASIC16.93■□□□□ 0.3
TREX1Q9NSU2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 RPS15P9-201ENST00000494093 319 ntBASIC16.93■□□□□ 0.3
TREX1Q9NSU2 AC073648.2-201ENST00000510116 352 ntBASIC16.93■□□□□ 0.3
TREX1Q9NSU2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TREX1Q9NSU2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 SNX33P1-201ENST00000592116 1762 ntBASIC16.92■□□□□ 0.3
TREX1Q9NSU2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.92■□□□□ 0.3
TREX1Q9NSU2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms