Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 CDY3P-201ENST00000454543 1618 ntBASIC20.2■□□□□ 0.82
RTN4Q9NQC3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC20.2■□□□□ 0.82
RTN4Q9NQC3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 GPAT2P1-201ENST00000444924 1672 ntBASIC20.19■□□□□ 0.82
RTN4Q9NQC3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 PHGDH-209ENST00000641074 1780 ntBASIC20.19■□□□□ 0.82
RTN4Q9NQC3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 RPPH1-201ENST00000516869 333 ntBASIC20.19■□□□□ 0.82
RTN4Q9NQC3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 GMCL1P1-201ENST00000463439 1581 ntBASIC20.19■□□□□ 0.82
RTN4Q9NQC3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.19■□□□□ 0.82
RTN4Q9NQC3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 STK25-235ENST00000543554 2556 ntTSL 2 BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 FSCN1P1-201ENST00000568912 1481 ntBASIC20.18■□□□□ 0.82
RTN4Q9NQC3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC20.18■□□□□ 0.82
RTN4Q9NQC3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 AC005840.4-201ENST00000541242 2494 ntBASIC20.17■□□□□ 0.82
RTN4Q9NQC3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 AC034236.2-201ENST00000606662 1610 ntBASIC20.17■□□□□ 0.82
RTN4Q9NQC3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 AC096733.2-201ENST00000609937 1394 ntBASIC20.17■□□□□ 0.82
RTN4Q9NQC3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RTN4Q9NQC3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms