Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 HMGA1P7-201ENST00000406908 502 ntBASIC19.78■□□□□ 0.76
SH2D4AQ9H788 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 TOP3BP1-201ENST00000420768 1380 ntBASIC19.78■□□□□ 0.76
SH2D4AQ9H788 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH2D4AQ9H788 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 RARRES2P8-201ENST00000566335 367 ntBASIC19.77■□□□□ 0.76
SH2D4AQ9H788 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH2D4AQ9H788 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SH2D4AQ9H788 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
SH2D4AQ9H788 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SH2D4AQ9H788 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SH2D4AQ9H788 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 AKAP8P1-201ENST00000434743 1349 ntBASIC19.76■□□□□ 0.75
SH2D4AQ9H788 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 AC004449.1-201ENST00000564240 433 ntBASIC19.76■□□□□ 0.75
SH2D4AQ9H788 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH2D4AQ9H788 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms