Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC12.96□□□□□ -0.33
VGLL1Q99990 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC12.96□□□□□ -0.33
VGLL1Q99990 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.96□□□□□ -0.33
VGLL1Q99990 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.96□□□□□ -0.33
VGLL1Q99990 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.96□□□□□ -0.33
VGLL1Q99990 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VGLL1Q99990 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.96□□□□□ -0.33
VGLL1Q99990 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.96□□□□□ -0.33
VGLL1Q99990 AC124864.1-201ENST00000623408 392 ntBASIC12.96□□□□□ -0.33
VGLL1Q99990 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VGLL1Q99990 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
VGLL1Q99990 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.96□□□□□ -0.33
VGLL1Q99990 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
VGLL1Q99990 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
VGLL1Q99990 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VGLL1Q99990 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VGLL1Q99990 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.96□□□□□ -0.34
VGLL1Q99990 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
VGLL1Q99990 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
VGLL1Q99990 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
VGLL1Q99990 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.96□□□□□ -0.34
VGLL1Q99990 LINC02199-201ENST00000506655 2702 ntBASIC12.96□□□□□ -0.34
VGLL1Q99990 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
VGLL1Q99990 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
VGLL1Q99990 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.96□□□□□ -0.34
VGLL1Q99990 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC12.96□□□□□ -0.34
VGLL1Q99990 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
VGLL1Q99990 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.95□□□□□ -0.34
VGLL1Q99990 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
VGLL1Q99990 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.95□□□□□ -0.34
VGLL1Q99990 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.95□□□□□ -0.34
VGLL1Q99990 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
VGLL1Q99990 TSPY22P-201ENST00000427496 604 ntBASIC12.95□□□□□ -0.34
VGLL1Q99990 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
VGLL1Q99990 AC103564.2-201ENST00000432853 1299 ntBASIC12.95□□□□□ -0.34
VGLL1Q99990 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.95□□□□□ -0.34
VGLL1Q99990 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.95□□□□□ -0.34
VGLL1Q99990 STK25P1-201ENST00000585406 838 ntBASIC12.95□□□□□ -0.34
VGLL1Q99990 AC005336.2-201ENST00000593183 939 ntBASIC12.95□□□□□ -0.34
VGLL1Q99990 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.95□□□□□ -0.34
VGLL1Q99990 AL138831.2-201ENST00000606564 490 ntBASIC12.95□□□□□ -0.34
VGLL1Q99990 AC083849.1-201ENST00000615227 514 ntBASIC12.95□□□□□ -0.34
VGLL1Q99990 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
VGLL1Q99990 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
VGLL1Q99990 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.95□□□□□ -0.34
VGLL1Q99990 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.95□□□□□ -0.34
VGLL1Q99990 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.95□□□□□ -0.34
VGLL1Q99990 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
VGLL1Q99990 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VGLL1Q99990 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
VGLL1Q99990 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.94□□□□□ -0.34
VGLL1Q99990 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VGLL1Q99990 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.94□□□□□ -0.34
VGLL1Q99990 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
VGLL1Q99990 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VGLL1Q99990 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VGLL1Q99990 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VGLL1Q99990 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.94□□□□□ -0.34
VGLL1Q99990 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VGLL1Q99990 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VGLL1Q99990 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VGLL1Q99990 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VGLL1Q99990 AC006449.5-201ENST00000610658 2098 ntBASIC12.94□□□□□ -0.34
VGLL1Q99990 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms