Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMOQ99835 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMOQ99835 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMOQ99835 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMOQ99835 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SMOQ99835 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SMOQ99835 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SMOQ99835 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMOQ99835 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMOQ99835 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMOQ99835 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMOQ99835 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMOQ99835 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SMOQ99835 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
SMOQ99835 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMOQ99835 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMOQ99835 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.77■□□□□ 0.44
SMOQ99835 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMOQ99835 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMOQ99835 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMOQ99835 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SMOQ99835 MIR1233-2-201ENST00000408138 82 ntBASIC17.77■□□□□ 0.44
SMOQ99835 MIR1233-1-201ENST00000408722 82 ntBASIC17.77■□□□□ 0.44
SMOQ99835 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.77■□□□□ 0.44
SMOQ99835 HCG4-201ENST00000418983 998 ntBASIC17.77■□□□□ 0.44
SMOQ99835 HTR5BP-201ENST00000430851 1154 ntBASIC17.77■□□□□ 0.44
SMOQ99835 FAM58CP-201ENST00000435741 640 ntBASIC17.77■□□□□ 0.44
SMOQ99835 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.77■□□□□ 0.44
SMOQ99835 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SMOQ99835 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.77■□□□□ 0.44
SMOQ99835 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.77■□□□□ 0.44
SMOQ99835 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.77■□□□□ 0.44
SMOQ99835 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMOQ99835 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.77■□□□□ 0.44
SMOQ99835 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.77■□□□□ 0.44
SMOQ99835 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.77■□□□□ 0.44
SMOQ99835 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.77■□□□□ 0.44
SMOQ99835 AC091812.2-201ENST00000619081 385 ntBASIC17.77■□□□□ 0.44
SMOQ99835 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMOQ99835 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMOQ99835 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMOQ99835 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMOQ99835 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SMOQ99835 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SMOQ99835 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SMOQ99835 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMOQ99835 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMOQ99835 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMOQ99835 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMOQ99835 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMOQ99835 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMOQ99835 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMOQ99835 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMOQ99835 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMOQ99835 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SMOQ99835 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMOQ99835 AC140658.5-201ENST00000438532 169 ntBASIC17.76■□□□□ 0.43
SMOQ99835 YBX1P5-201ENST00000509441 847 ntBASIC17.76■□□□□ 0.43
SMOQ99835 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
SMOQ99835 AC087641.1-201ENST00000557561 1021 ntBASIC17.76■□□□□ 0.43
SMOQ99835 AC005829.1-201ENST00000570002 483 ntBASIC17.76■□□□□ 0.43
SMOQ99835 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
SMOQ99835 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.76■□□□□ 0.43
SMOQ99835 GPALPP1-207ENST00000611650 899 ntBASIC17.76■□□□□ 0.43
SMOQ99835 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SMOQ99835 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMOQ99835 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMOQ99835 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SMOQ99835 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SMOQ99835 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SMOQ99835 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SMOQ99835 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMOQ99835 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.76■□□□□ 0.43
SMOQ99835 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMOQ99835 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SMOQ99835 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.75■□□□□ 0.43
SMOQ99835 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.75■□□□□ 0.43
SMOQ99835 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SMOQ99835 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SMOQ99835 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 MKNK2P1-201ENST00000437526 628 ntBASIC17.75■□□□□ 0.43
SMOQ99835 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.75■□□□□ 0.43
SMOQ99835 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.75■□□□□ 0.43
SMOQ99835 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
SMOQ99835 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.75■□□□□ 0.43
SMOQ99835 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms