Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX27Q96L92 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SNX27Q96L92 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX27Q96L92 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX27Q96L92 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX27Q96L92 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX27Q96L92 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
SNX27Q96L92 PCDHB18P-201ENST00000524813 2368 ntBASIC18.3■□□□□ 0.52
SNX27Q96L92 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX27Q96L92 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.3■□□□□ 0.52
SNX27Q96L92 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.3■□□□□ 0.52
SNX27Q96L92 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
SNX27Q96L92 AC005225.4-201ENST00000557330 545 ntBASIC18.3■□□□□ 0.52
SNX27Q96L92 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX27Q96L92 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX27Q96L92 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.3■□□□□ 0.52
SNX27Q96L92 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX27Q96L92 AC092902.6-201ENST00000641783 218 ntBASIC18.3■□□□□ 0.52
SNX27Q96L92 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX27Q96L92 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX27Q96L92 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX27Q96L92 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SNX27Q96L92 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX27Q96L92 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.3■□□□□ 0.52
SNX27Q96L92 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX27Q96L92 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX27Q96L92 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX27Q96L92 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX27Q96L92 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX27Q96L92 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX27Q96L92 AL021920.2-201ENST00000624828 1351 ntBASIC18.3■□□□□ 0.52
SNX27Q96L92 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SNX27Q96L92 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SNX27Q96L92 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.29■□□□□ 0.52
SNX27Q96L92 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX27Q96L92 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.29■□□□□ 0.52
SNX27Q96L92 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX27Q96L92 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
SNX27Q96L92 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.29■□□□□ 0.52
SNX27Q96L92 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX27Q96L92 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX27Q96L92 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
SNX27Q96L92 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX27Q96L92 HMGA1P7-201ENST00000406908 502 ntBASIC18.29■□□□□ 0.52
SNX27Q96L92 AC140658.5-201ENST00000438532 169 ntBASIC18.29■□□□□ 0.52
SNX27Q96L92 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.29■□□□□ 0.52
SNX27Q96L92 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX27Q96L92 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.29■□□□□ 0.52
SNX27Q96L92 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX27Q96L92 FZD10-202ENST00000539839 3282 ntBASIC18.29■□□□□ 0.52
SNX27Q96L92 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX27Q96L92 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SNX27Q96L92 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX27Q96L92 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX27Q96L92 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX27Q96L92 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX27Q96L92 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX27Q96L92 AC012569.1-201ENST00000591191 1524 ntBASIC18.28■□□□□ 0.52
SNX27Q96L92 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SNX27Q96L92 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX27Q96L92 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX27Q96L92 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SNX27Q96L92 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX27Q96L92 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX27Q96L92 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX27Q96L92 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX27Q96L92 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SNX27Q96L92 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
SNX27Q96L92 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX27Q96L92 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.28■□□□□ 0.52
SNX27Q96L92 HCG4-201ENST00000418983 998 ntBASIC18.28■□□□□ 0.52
SNX27Q96L92 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
SNX27Q96L92 CEND1P1-201ENST00000451006 455 ntBASIC18.28■□□□□ 0.52
SNX27Q96L92 MEIS3P1-201ENST00000495167 958 ntBASIC18.28■□□□□ 0.52
SNX27Q96L92 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.28■□□□□ 0.52
SNX27Q96L92 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.28■□□□□ 0.52
SNX27Q96L92 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.28■□□□□ 0.52
SNX27Q96L92 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.28■□□□□ 0.52
SNX27Q96L92 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.28■□□□□ 0.52
SNX27Q96L92 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.28■□□□□ 0.52
SNX27Q96L92 MIR4745-201ENST00000577608 62 ntBASIC18.28■□□□□ 0.52
SNX27Q96L92 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.28■□□□□ 0.52
SNX27Q96L92 MPDU1-223ENST00000582151 728 ntBASIC18.28■□□□□ 0.52
SNX27Q96L92 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX27Q96L92 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX27Q96L92 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX27Q96L92 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX27Q96L92 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX27Q96L92 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX27Q96L92 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX27Q96L92 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX27Q96L92 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SNX27Q96L92 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.28■□□□□ 0.52
SNX27Q96L92 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX27Q96L92 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX27Q96L92 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SNX27Q96L92 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX27Q96L92 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX27Q96L92 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX27Q96L92 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms