Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IFT43Q96FT9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.6■□□□□ 0.41
IFT43Q96FT9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFT43Q96FT9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFT43Q96FT9 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
IFT43Q96FT9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.6■□□□□ 0.41
IFT43Q96FT9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFT43Q96FT9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFT43Q96FT9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.6■□□□□ 0.41
IFT43Q96FT9 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFT43Q96FT9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFT43Q96FT9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFT43Q96FT9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFT43Q96FT9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.6■□□□□ 0.41
IFT43Q96FT9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFT43Q96FT9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IFT43Q96FT9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.59■□□□□ 0.41
IFT43Q96FT9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
IFT43Q96FT9 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
IFT43Q96FT9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
IFT43Q96FT9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.59■□□□□ 0.41
IFT43Q96FT9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.59■□□□□ 0.41
IFT43Q96FT9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
IFT43Q96FT9 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.59■□□□□ 0.41
IFT43Q96FT9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.59■□□□□ 0.41
IFT43Q96FT9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
IFT43Q96FT9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.59■□□□□ 0.41
IFT43Q96FT9 GPALPP1-207ENST00000611650 899 ntBASIC17.59■□□□□ 0.41
IFT43Q96FT9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.59■□□□□ 0.41
IFT43Q96FT9 AL139288.1-201ENST00000623748 933 ntBASIC17.59■□□□□ 0.41
IFT43Q96FT9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.59■□□□□ 0.41
IFT43Q96FT9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
IFT43Q96FT9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
IFT43Q96FT9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.59■□□□□ 0.41
IFT43Q96FT9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IFT43Q96FT9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.59■□□□□ 0.41
IFT43Q96FT9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
IFT43Q96FT9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
IFT43Q96FT9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
IFT43Q96FT9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.58■□□□□ 0.41
IFT43Q96FT9 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
IFT43Q96FT9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
IFT43Q96FT9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
IFT43Q96FT9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IFT43Q96FT9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
IFT43Q96FT9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.58■□□□□ 0.4
IFT43Q96FT9 SIGLEC30P-201ENST00000455569 941 ntBASIC17.58■□□□□ 0.4
IFT43Q96FT9 KRT18P58-201ENST00000527480 1120 ntBASIC17.58■□□□□ 0.4
IFT43Q96FT9 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
IFT43Q96FT9 AC106730.1-201ENST00000566722 1090 ntBASIC17.58■□□□□ 0.4
IFT43Q96FT9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.58■□□□□ 0.4
IFT43Q96FT9 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.58■□□□□ 0.4
IFT43Q96FT9 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.58■□□□□ 0.4
IFT43Q96FT9 AC006538.3-201ENST00000612495 578 ntBASIC17.58■□□□□ 0.4
IFT43Q96FT9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.58■□□□□ 0.4
IFT43Q96FT9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IFT43Q96FT9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
IFT43Q96FT9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IFT43Q96FT9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IFT43Q96FT9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.58■□□□□ 0.4
IFT43Q96FT9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IFT43Q96FT9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IFT43Q96FT9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.58■□□□□ 0.4
IFT43Q96FT9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
IFT43Q96FT9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
IFT43Q96FT9 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.57■□□□□ 0.4
IFT43Q96FT9 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IFT43Q96FT9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
IFT43Q96FT9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IFT43Q96FT9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IFT43Q96FT9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.57■□□□□ 0.4
IFT43Q96FT9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
IFT43Q96FT9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IFT43Q96FT9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IFT43Q96FT9 AC243591.1-201ENST00000452967 1364 ntBASIC17.57■□□□□ 0.4
IFT43Q96FT9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.57■□□□□ 0.4
IFT43Q96FT9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
IFT43Q96FT9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IFT43Q96FT9 PCDHB19P-201ENST00000570871 2371 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms