Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 TIMM8BP1-201ENST00000452384 211 ntBASIC16.91■□□□□ 0.3
ARRDC3Q96B67 KRT8P48-201ENST00000515599 1220 ntBASIC16.91■□□□□ 0.3
ARRDC3Q96B67 AC087641.1-201ENST00000557561 1021 ntBASIC16.91■□□□□ 0.3
ARRDC3Q96B67 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.91■□□□□ 0.3
ARRDC3Q96B67 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 AL023806.1-201ENST00000603994 1649 ntBASIC16.91■□□□□ 0.3
ARRDC3Q96B67 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.91■□□□□ 0.3
ARRDC3Q96B67 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.9■□□□□ 0.3
ARRDC3Q96B67 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 MIR4492-201ENST00000581627 80 ntBASIC16.9■□□□□ 0.3
ARRDC3Q96B67 AC026120.1-201ENST00000611536 926 ntBASIC16.9■□□□□ 0.3
ARRDC3Q96B67 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARRDC3Q96B67 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
ARRDC3Q96B67 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ARRDC3Q96B67 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ARRDC3Q96B67 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
ARRDC3Q96B67 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 RNU1-129P-201ENST00000384064 167 ntBASIC16.89■□□□□ 0.29
ARRDC3Q96B67 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 TFAMP1-201ENST00000412727 736 ntBASIC16.89■□□□□ 0.29
ARRDC3Q96B67 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 U1.21-201ENST00000580816 167 ntBASIC16.89■□□□□ 0.29
ARRDC3Q96B67 CYP2A7P1-201ENST00000595391 815 ntBASIC16.89■□□□□ 0.29
ARRDC3Q96B67 AC004835.2-201ENST00000603762 682 ntBASIC16.89■□□□□ 0.29
ARRDC3Q96B67 AL031055.1-201ENST00000606362 631 ntBASIC16.89■□□□□ 0.29
ARRDC3Q96B67 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 AC108860.2-201ENST00000562760 2183 ntBASIC16.89■□□□□ 0.29
ARRDC3Q96B67 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 AC092068.3-201ENST00000587894 2016 ntBASIC16.89■□□□□ 0.29
ARRDC3Q96B67 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARRDC3Q96B67 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.89■□□□□ 0.29
ARRDC3Q96B67 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARRDC3Q96B67 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARRDC3Q96B67 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARRDC3Q96B67 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ARRDC3Q96B67 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARRDC3Q96B67 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms