Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
HPS3Q969F9 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.86■□□□□ 0.61
HPS3Q969F9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS3Q969F9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS3Q969F9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.85■□□□□ 0.61
HPS3Q969F9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS3Q969F9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS3Q969F9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
HPS3Q969F9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS3Q969F9 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS3Q969F9 AL603756.1-201ENST00000606511 2163 ntBASIC18.85■□□□□ 0.61
HPS3Q969F9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS3Q969F9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS3Q969F9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS3Q969F9 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HPS3Q969F9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HPS3Q969F9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HPS3Q969F9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.85■□□□□ 0.61
HPS3Q969F9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS3Q969F9 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.85■□□□□ 0.61
HPS3Q969F9 PAWRP1-201ENST00000451083 565 ntBASIC18.85■□□□□ 0.61
HPS3Q969F9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.85■□□□□ 0.61
HPS3Q969F9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.85■□□□□ 0.61
HPS3Q969F9 AP002469.2-201ENST00000531724 424 ntBASIC18.85■□□□□ 0.61
HPS3Q969F9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HPS3Q969F9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.85■□□□□ 0.61
HPS3Q969F9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HPS3Q969F9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
HPS3Q969F9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS3Q969F9 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HPS3Q969F9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS3Q969F9 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HPS3Q969F9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HPS3Q969F9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HPS3Q969F9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HPS3Q969F9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.84■□□□□ 0.61
HPS3Q969F9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.84■□□□□ 0.61
HPS3Q969F9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS3Q969F9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS3Q969F9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS3Q969F9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HPS3Q969F9 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
HPS3Q969F9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS3Q969F9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HPS3Q969F9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS3Q969F9 PI4KAP1-204ENST00000612579 1703 ntBASIC18.84■□□□□ 0.61
HPS3Q969F9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS3Q969F9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.84■□□□□ 0.61
HPS3Q969F9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
HPS3Q969F9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.84■□□□□ 0.61
HPS3Q969F9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS3Q969F9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HPS3Q969F9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS3Q969F9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
HPS3Q969F9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS3Q969F9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HPS3Q969F9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS3Q969F9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS3Q969F9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS3Q969F9 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.84■□□□□ 0.61
HPS3Q969F9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS3Q969F9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.84■□□□□ 0.61
HPS3Q969F9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.84■□□□□ 0.61
HPS3Q969F9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.84■□□□□ 0.61
HPS3Q969F9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.84■□□□□ 0.61
HPS3Q969F9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HPS3Q969F9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS3Q969F9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.84■□□□□ 0.61
HPS3Q969F9 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HPS3Q969F9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.83■□□□□ 0.61
HPS3Q969F9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HPS3Q969F9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
HPS3Q969F9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
HPS3Q969F9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HPS3Q969F9 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.83■□□□□ 0.61
HPS3Q969F9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
HPS3Q969F9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.83■□□□□ 0.61
HPS3Q969F9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
HPS3Q969F9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HPS3Q969F9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
HPS3Q969F9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.83■□□□□ 0.61
HPS3Q969F9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HPS3Q969F9 AC004870.1-201ENST00000315132 882 ntBASIC18.83■□□□□ 0.6
HPS3Q969F9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.83■□□□□ 0.6
HPS3Q969F9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.83■□□□□ 0.6
HPS3Q969F9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.83■□□□□ 0.6
HPS3Q969F9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HPS3Q969F9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HPS3Q969F9 KRT18P67-201ENST00000432816 1264 ntBASIC18.83■□□□□ 0.6
HPS3Q969F9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HPS3Q969F9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HPS3Q969F9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HPS3Q969F9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.83■□□□□ 0.6
HPS3Q969F9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HPS3Q969F9 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HPS3Q969F9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.83■□□□□ 0.6
HPS3Q969F9 PCDH8P1-201ENST00000428983 2773 ntBASIC18.83■□□□□ 0.6
HPS3Q969F9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HPS3Q969F9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
HPS3Q969F9 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms